| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710128
Identifier: 218710128
GI number: 218710128
Start: 2305001
End: 2305354
Strand: Reverse
Name: 218710128
Synonym: VS_2149
Alternate gene names: NA
Gene position: 2305354-2305001 (Counterclockwise)
Preceding gene: 218710129
Following gene: 218710127
Centisome position: 69.87
GC content: 44.07
Gene sequence:
>354_bases ATGCTAACTATGGAAAGATATATGAATAAGTGGATGCTGCTCCTCTCTCTGTTTTCAGCTGCCTCATACAGTGATTCTCA TTTTGCAACCGAGAGTGTTGATACTCCCGACTTCAATTCATCGGGTTTCAAGCCGCCTGAGGTTTCTCGACAGGAACAAA ACAATATCGTTTGTGAAAGTGTCGTTTGTAATTCAATCTCGCGATCGCAGCCCGTTCCTGAAGTGGGCGAAGTACCGGAT CGAGAGCCGAATAAAACATTAGAAACGATAGCGAGTGCGATTTTCATCGCGGGCGAAATTGGTATTGCAGACAATTTGAT TGAACCAGACGAGGAGCATTATATTGTCGAGTAA
Upstream 100 bases:
>100_bases AGCGCGGATATTCTGATAAGCGTCTAGGGAAATATGAATTAATGATAATAAAACACTGTTCATAATTATTTTAATTAGAT AGTATTTATAAATCTAGTGA
Downstream 100 bases:
>100_bases TGATTAATTAAAATGGCGGCATGTGAAGCGGAAATACAGAGCTTTCTGCATTCGTTCATTGATTAAATATTTACGAAGTT TTTAACAAGGACGAAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLTMERYMNKWMLLLSLFSAASYSDSHFATESVDTPDFNSSGFKPPEVSRQEQNNIVCESVVCNSISRSQPVPEVGEVPD REPNKTLETIASAIFIAGEIGIADNLIEPDEEHYIVE
Sequences:
>Translated_117_residues MLTMERYMNKWMLLLSLFSAASYSDSHFATESVDTPDFNSSGFKPPEVSRQEQNNIVCESVVCNSISRSQPVPEVGEVPD REPNKTLETIASAIFIAGEIGIADNLIEPDEEHYIVE >Mature_117_residues MLTMERYMNKWMLLLSLFSAASYSDSHFATESVDTPDFNSSGFKPPEVSRQEQNNIVCESVVCNSISRSQPVPEVGEVPD REPNKTLETIASAIFIAGEIGIADNLIEPDEEHYIVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13056; Mature: 13056
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTMERYMNKWMLLLSLFSAASYSDSHFATESVDTPDFNSSGFKPPEVSRQEQNNIVCES CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHH VVCNSISRSQPVPEVGEVPDREPNKTLETIASAIFIAGEIGIADNLIEPDEEHYIVE HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MLTMERYMNKWMLLLSLFSAASYSDSHFATESVDTPDFNSSGFKPPEVSRQEQNNIVCES CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHH VVCNSISRSQPVPEVGEVPDREPNKTLETIASAIFIAGEIGIADNLIEPDEEHYIVE HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA