Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710121

Identifier: 218710121

GI number: 218710121

Start: 2298777

End: 2300621

Strand: Reverse

Name: 218710121

Synonym: VS_2142

Alternate gene names: NA

Gene position: 2300621-2298777 (Counterclockwise)

Preceding gene: 218710123

Following gene: 218710119

Centisome position: 69.73

GC content: 43.69

Gene sequence:

>1845_bases
TTGGGCAAGGCAGAAAACCCTAAAAGCATAAGTATGAACAAATGGAGAGAGAACATGAAGGTTATAAATTATTTACTTAG
TGTGCTTTTGTTGTTTAGTAGCCCCCAGTTGGTGTGGGCTACTGTTGATGTGATGGAACTCGATGGTAACGCGACCAGTG
ATAATAGTGGTATTGATTGGGACGATGTAAATGATCCCAACAGCATGGTTGGGATTGCAGAATTTTTCGAAAAAGACCGC
AATGGTATCGACCAAATCTTTTGGAAGGGTGGATCAAAAGATGATTCCGACATTACGGATTGGGCGTTCCGTACCGCGTC
ACCACAACCAAAAGATGACTTTACCAATGCGTATGCCGCTGCCTTTGAAAGCGAAGGTGACTTGCTGATTTACTTTGGTG
CAGACAGATATGCGAACAATGGTGATATGTACATTGGGTTTTGGTTTTTACAAGACCAGATTGGATTGCCGGATGGTAAA
ACCAAAGGCGACTTTGTTGGGCAGCATATCAATGGAGACATCCTTGTGCTGATTTCATTCCCACAAGCAAGTGGCGGTAA
TCCGTATATAGAAGTGTTGCAGTGGGATTTGAATAATGGCGATGTCACCGACAACATGACCAGAATCTTCCAAACTGACG
GTGACCCTAAGTCGAATGATTTCGTTGGTGCAAGATGTGGCAGTGGTGCTGTCGGTGTCGAGAAGATATGTGCGATTTCA
AATGATGATTCTATCGGGGCAATTGATCTTCCCAATGTACAAGGTTGGGAATACCTAGCGAAAACGGGTGAAACAACCTC
TATTCCGACAGAGAGCTTTGTTGAAGGACGTCTGAATTTATCTGCGTTGTTGAACGATGAGTTTGGTATTGAAGATATTC
CATGTTTCAGTAGCTTCTTAGTGGAGTCACGAGCTTCCCGTTCGATTGATGCATCTTTGGCTGACTTCGTTGTCGGTTCA
TTCAGTTTATGTAGTATCAGCATAGCGGCGACTTGTAACACAACCAGCTTTACGGTTGATGGTATGTTCAACATAGATTA
CACCGTGACGGTCACCAACACTGGCCCTGGTTCGTTAGGCACCAATGGTGACTACGAAGTGGCCTTTTTATCTGAGTCAC
CAATCTTAGGTGCGCTTCCAGTGGTTGGTAATGGCGATGAAGTGTGGAGTGTCGGTGAGTCATTCTCATTCATGGGTAAT
TACTTGTCTGTAAATAATGGTGCTGTCGGTGTCATAGATGGTGCGGTGGATCTTGATGGGCTTATCGTGAATGCTCAAGC
TCCCGTGGCTTACAATTGTCCGCCAATAGACTTGAGTCCAATGGTTGAGATTTCTAAGGTATGTAATAGCTTCTTAGAAG
TTGATAGCGGTCAAGTTGTGCTTAAGAAAACCTATGATGTTGAAATATGTAATATCGGTGATATCCCATTGGCTATTGAA
TCGCTGGTGGATTCTAAGGATGACTCTTTGAGCCGTTCTGATTTACCTACTGAAGTAGTCAACAGCAGTTATTACCTCGA
CTTTGCTTTACCTTGTGATGATCTTGAGGATGTGACCACATGTGGTGCTGGTAATATGTGTAGTGCATTAAGTGCCAACC
CTGAGCTGTTTGCTTGTAAAACGGGTGAAGGAGAGTGGATACCGAACTTTGGTGATGCGATTGGCCAAGTGTGTACACAA
GTAAGTAAAACTTATGCACCAAATGTGTTACCAACCGGAACTGCAGGGATGCTATCTAATCAAGTGACAGCAACGTTTGA
CTCGCTGTTCTTACAACAAGCATTTATGGAAACATCGAACATTGCAACCTGTGATGTTTGTCCATTTACTGTACCTGAGC
CATAA

Upstream 100 bases:

>100_bases
GTGTTCCGTCAATATATAAACATCAATCAAATCAATTAGTTGAACTTGGCTTGGAATATGCTCTATCGAACCTACGAATT
GCTAAAGGATTTTCTCCAAT

Downstream 100 bases:

>100_bases
GTACTTTCATTAATTGAGTACAACTAAACTCCAAAGCAGCCTAATTCGTTAGGCTGCTTTATTAGTTATTTAGCTAGCTA
GGCGACTTAAATTACTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MGKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDWDDVNDPNSMVGIAEFFEKDR
NGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAAAFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGK
TKGDFVGQHINGDILVLISFPQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS
NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFLVESRASRSIDASLADFVVGS
FSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLGTNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGN
YLSVNNGAVGVIDGAVDLDGLIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE
SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACKTGEGEWIPNFGDAIGQVCTQ
VSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSNIATCDVCPFTVPEP

Sequences:

>Translated_614_residues
MGKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDWDDVNDPNSMVGIAEFFEKDR
NGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAAAFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGK
TKGDFVGQHINGDILVLISFPQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS
NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFLVESRASRSIDASLADFVVGS
FSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLGTNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGN
YLSVNNGAVGVIDGAVDLDGLIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE
SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACKTGEGEWIPNFGDAIGQVCTQ
VSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSNIATCDVCPFTVPEP
>Mature_613_residues
GKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDWDDVNDPNSMVGIAEFFEKDRN
GIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAAAFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGKT
KGDFVGQHINGDILVLISFPQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAISN
DDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFLVESRASRSIDASLADFVVGSF
SLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLGTNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGNY
LSVNNGAVGVIDGAVDLDGLIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIES
LVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACKTGEGEWIPNFGDAIGQVCTQV
SKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSNIATCDVCPFTVPEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65937; Mature: 65806

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC
DDVNDPNSMVGIAEFFEKDRNGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAA
CCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHH
AFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGKTKGDFVGQHINGDILVLISF
HCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEC
PQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS
CCCCCCCCEEEEEEEECCCCCCCCCHHEEEECCCCCCCCCEEEECCCCCCCCHHHHEEEC
NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFL
CCCCCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHH
VESRASRSIDASLADFVVGSFSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLG
HHHHCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEEEEEEEEEECCCCCCCC
TNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGNYLSVNNGAVGVIDGAVDLDG
CCCCEEEEEEECCCCEEEECEECCCCHHEECCCCHHHCCCEEEECCCEEEEEECCCCCCC
LIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE
EEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCCCCHHHHH
SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACK
HHHCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCEEEEE
TGEGEWIPNFGDAIGQVCTQVSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSN
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
IATCDVCPFTVPEP
CEEEECCCCCCCCC
>Mature Secondary Structure 
GKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC
DDVNDPNSMVGIAEFFEKDRNGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAA
CCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHH
AFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGKTKGDFVGQHINGDILVLISF
HCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEC
PQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS
CCCCCCCCEEEEEEEECCCCCCCCCHHEEEECCCCCCCCCEEEECCCCCCCCHHHHEEEC
NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFL
CCCCCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHH
VESRASRSIDASLADFVVGSFSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLG
HHHHCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEEEEEEEEEECCCCCCCC
TNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGNYLSVNNGAVGVIDGAVDLDG
CCCCEEEEEEECCCCEEEECEECCCCHHEECCCCHHHCCCEEEECCCEEEEEECCCCCCC
LIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE
EEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCCCCHHHHH
SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACK
HHHCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCEEEEE
TGEGEWIPNFGDAIGQVCTQVSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSN
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
IATCDVCPFTVPEP
CEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA