| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710121
Identifier: 218710121
GI number: 218710121
Start: 2298777
End: 2300621
Strand: Reverse
Name: 218710121
Synonym: VS_2142
Alternate gene names: NA
Gene position: 2300621-2298777 (Counterclockwise)
Preceding gene: 218710123
Following gene: 218710119
Centisome position: 69.73
GC content: 43.69
Gene sequence:
>1845_bases TTGGGCAAGGCAGAAAACCCTAAAAGCATAAGTATGAACAAATGGAGAGAGAACATGAAGGTTATAAATTATTTACTTAG TGTGCTTTTGTTGTTTAGTAGCCCCCAGTTGGTGTGGGCTACTGTTGATGTGATGGAACTCGATGGTAACGCGACCAGTG ATAATAGTGGTATTGATTGGGACGATGTAAATGATCCCAACAGCATGGTTGGGATTGCAGAATTTTTCGAAAAAGACCGC AATGGTATCGACCAAATCTTTTGGAAGGGTGGATCAAAAGATGATTCCGACATTACGGATTGGGCGTTCCGTACCGCGTC ACCACAACCAAAAGATGACTTTACCAATGCGTATGCCGCTGCCTTTGAAAGCGAAGGTGACTTGCTGATTTACTTTGGTG CAGACAGATATGCGAACAATGGTGATATGTACATTGGGTTTTGGTTTTTACAAGACCAGATTGGATTGCCGGATGGTAAA ACCAAAGGCGACTTTGTTGGGCAGCATATCAATGGAGACATCCTTGTGCTGATTTCATTCCCACAAGCAAGTGGCGGTAA TCCGTATATAGAAGTGTTGCAGTGGGATTTGAATAATGGCGATGTCACCGACAACATGACCAGAATCTTCCAAACTGACG GTGACCCTAAGTCGAATGATTTCGTTGGTGCAAGATGTGGCAGTGGTGCTGTCGGTGTCGAGAAGATATGTGCGATTTCA AATGATGATTCTATCGGGGCAATTGATCTTCCCAATGTACAAGGTTGGGAATACCTAGCGAAAACGGGTGAAACAACCTC TATTCCGACAGAGAGCTTTGTTGAAGGACGTCTGAATTTATCTGCGTTGTTGAACGATGAGTTTGGTATTGAAGATATTC CATGTTTCAGTAGCTTCTTAGTGGAGTCACGAGCTTCCCGTTCGATTGATGCATCTTTGGCTGACTTCGTTGTCGGTTCA TTCAGTTTATGTAGTATCAGCATAGCGGCGACTTGTAACACAACCAGCTTTACGGTTGATGGTATGTTCAACATAGATTA CACCGTGACGGTCACCAACACTGGCCCTGGTTCGTTAGGCACCAATGGTGACTACGAAGTGGCCTTTTTATCTGAGTCAC CAATCTTAGGTGCGCTTCCAGTGGTTGGTAATGGCGATGAAGTGTGGAGTGTCGGTGAGTCATTCTCATTCATGGGTAAT TACTTGTCTGTAAATAATGGTGCTGTCGGTGTCATAGATGGTGCGGTGGATCTTGATGGGCTTATCGTGAATGCTCAAGC TCCCGTGGCTTACAATTGTCCGCCAATAGACTTGAGTCCAATGGTTGAGATTTCTAAGGTATGTAATAGCTTCTTAGAAG TTGATAGCGGTCAAGTTGTGCTTAAGAAAACCTATGATGTTGAAATATGTAATATCGGTGATATCCCATTGGCTATTGAA TCGCTGGTGGATTCTAAGGATGACTCTTTGAGCCGTTCTGATTTACCTACTGAAGTAGTCAACAGCAGTTATTACCTCGA CTTTGCTTTACCTTGTGATGATCTTGAGGATGTGACCACATGTGGTGCTGGTAATATGTGTAGTGCATTAAGTGCCAACC CTGAGCTGTTTGCTTGTAAAACGGGTGAAGGAGAGTGGATACCGAACTTTGGTGATGCGATTGGCCAAGTGTGTACACAA GTAAGTAAAACTTATGCACCAAATGTGTTACCAACCGGAACTGCAGGGATGCTATCTAATCAAGTGACAGCAACGTTTGA CTCGCTGTTCTTACAACAAGCATTTATGGAAACATCGAACATTGCAACCTGTGATGTTTGTCCATTTACTGTACCTGAGC CATAA
Upstream 100 bases:
>100_bases GTGTTCCGTCAATATATAAACATCAATCAAATCAATTAGTTGAACTTGGCTTGGAATATGCTCTATCGAACCTACGAATT GCTAAAGGATTTTCTCCAAT
Downstream 100 bases:
>100_bases GTACTTTCATTAATTGAGTACAACTAAACTCCAAAGCAGCCTAATTCGTTAGGCTGCTTTATTAGTTATTTAGCTAGCTA GGCGACTTAAATTACTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MGKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDWDDVNDPNSMVGIAEFFEKDR NGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAAAFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGK TKGDFVGQHINGDILVLISFPQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFLVESRASRSIDASLADFVVGS FSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLGTNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGN YLSVNNGAVGVIDGAVDLDGLIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACKTGEGEWIPNFGDAIGQVCTQ VSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSNIATCDVCPFTVPEP
Sequences:
>Translated_614_residues MGKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDWDDVNDPNSMVGIAEFFEKDR NGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAAAFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGK TKGDFVGQHINGDILVLISFPQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFLVESRASRSIDASLADFVVGS FSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLGTNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGN YLSVNNGAVGVIDGAVDLDGLIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACKTGEGEWIPNFGDAIGQVCTQ VSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSNIATCDVCPFTVPEP >Mature_613_residues GKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDWDDVNDPNSMVGIAEFFEKDRN GIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAAAFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGKT KGDFVGQHINGDILVLISFPQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAISN DDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFLVESRASRSIDASLADFVVGSF SLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLGTNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGNY LSVNNGAVGVIDGAVDLDGLIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIES LVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACKTGEGEWIPNFGDAIGQVCTQV SKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSNIATCDVCPFTVPEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65937; Mature: 65806
Theoretical pI: Translated: 3.69; Mature: 3.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC DDVNDPNSMVGIAEFFEKDRNGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAA CCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHH AFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGKTKGDFVGQHINGDILVLISF HCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEC PQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS CCCCCCCCEEEEEEEECCCCCCCCCHHEEEECCCCCCCCCEEEECCCCCCCCHHHHEEEC NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFL CCCCCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHH VESRASRSIDASLADFVVGSFSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLG HHHHCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEEEEEEEEEECCCCCCCC TNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGNYLSVNNGAVGVIDGAVDLDG CCCCEEEEEEECCCCEEEECEECCCCHHEECCCCHHHCCCEEEECCCEEEEEECCCCCCC LIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE EEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCCCCHHHHH SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACK HHHCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCEEEEE TGEGEWIPNFGDAIGQVCTQVSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSN CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC IATCDVCPFTVPEP CEEEECCCCCCCCC >Mature Secondary Structure GKAENPKSISMNKWRENMKVINYLLSVLLLFSSPQLVWATVDVMELDGNATSDNSGIDW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC DDVNDPNSMVGIAEFFEKDRNGIDQIFWKGGSKDDSDITDWAFRTASPQPKDDFTNAYAA CCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHEECCCCCCCHHHHHHHHH AFESEGDLLIYFGADRYANNGDMYIGFWFLQDQIGLPDGKTKGDFVGQHINGDILVLISF HCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEEC PQASGGNPYIEVLQWDLNNGDVTDNMTRIFQTDGDPKSNDFVGARCGSGAVGVEKICAIS CCCCCCCCEEEEEEEECCCCCCCCCHHEEEECCCCCCCCCEEEECCCCCCCCHHHHEEEC NDDSIGAIDLPNVQGWEYLAKTGETTSIPTESFVEGRLNLSALLNDEFGIEDIPCFSSFL CCCCCCEEECCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHH VESRASRSIDASLADFVVGSFSLCSISIAATCNTTSFTVDGMFNIDYTVTVTNTGPGSLG HHHHCCCCHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEEEEEEEEEEECCCCCCCC TNGDYEVAFLSESPILGALPVVGNGDEVWSVGESFSFMGNYLSVNNGAVGVIDGAVDLDG CCCCEEEEEEECCCCEEEECEECCCCHHEECCCCHHHCCCEEEECCCEEEEEECCCCCCC LIVNAQAPVAYNCPPIDLSPMVEISKVCNSFLEVDSGQVVLKKTYDVEICNIGDIPLAIE EEEECCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECEEEEECCCCCHHHHH SLVDSKDDSLSRSDLPTEVVNSSYYLDFALPCDDLEDVTTCGAGNMCSALSANPELFACK HHHCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHCCCCCEEEEE TGEGEWIPNFGDAIGQVCTQVSKTYAPNVLPTGTAGMLSNQVTATFDSLFLQQAFMETSN CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC IATCDVCPFTVPEP CEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA