| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710101
Identifier: 218710101
GI number: 218710101
Start: 2281388
End: 2282659
Strand: Direct
Name: 218710101
Synonym: VS_2122
Alternate gene names: NA
Gene position: 2281388-2282659 (Clockwise)
Preceding gene: 218710095
Following gene: 218710102
Centisome position: 69.15
GC content: 41.35
Gene sequence:
>1272_bases ATGAGGCGATTACTTACTGCAATATTTTTCAGTTCAGCATTGTTACTCAGTTCAGTGCTATCAGGGTGCAGTAATTTTAG AAATCTATCGAATGAGATAGACGCAATTGATGCCTATACCGATCAGTACCAAATCATTTTGACCGAACCAGCGTCGGGCT CAGCCGTCGTTATTCAACAGATAAAAGATATCAATAAAAGCGAAGTTGATGGCTACGACGGCATAATAGATAGCGACAGT ATTCAATTGCAGCTATCTAGAAAAATACACTACCTACTTGTCTTTGATGATAAAAACCAAGATTTAACCCTACAAGCTGA CGAACCATTCAGTGTCGTTAATCTGCACGATCACCAAGACAATTCTACAGTAAGAATTTCACTCGCCATTGACGAAAACA AAGCGCCCAGAGCCTTTGTTAATCACTCACTGTCCTCTTTACTGAAAGTGGAATTGGATCTTGTCGATATAGGCACTGTT GTGAGTTTAACGGATCCGCCCTTTAAGCGAGAAAACGCTAAGCTCGGCATGTGGCAGCCAGTAACATTCTTTTTTGAAGG GAATGCTGGACTCTACTTTTTGTCGGAATACGACCCAACTAAAATCCCTATCCTATTTGTACATGGTATCAACGCAACCG CTTTAGATTTTGCTCCATTAATCGAAAAAATCGATCAATCTAAATACCAAATATGGGTATTCAACTACCCTTCTGGCTTA TCTCTGGTTTTAAGCTCGAAAGGCTTAAATAACCTGCTGCATACCATAGTGACGGAATACAAGATCCAACAATTACACGT GGTGGCACACAGCATGGGTGGGCTGATCGTGGCAAACTGTGTTCGTCAGTGCCAAATCGGGCAGTTGTGCAATTTTGTCA GCAGCATCACCACCATATCTTCCCCGTTTGGTGGTGTGGCATCCGCCAAGCAAGGGGTTGAATACTCCCCTATCGTGATG CCAGCCTGGGTAGATTTAAATCCAGACGGAAAATTTATCGCCGAGTTATTTGGTAGTAAGACTAAAAACCATACCCCGCA TTTTTTAGCGTTTGGATACAATTCAGGGGAGTTATTTAATACCAACAGTAATGATGGCGTAATTGACCTATCAAGCCAGC TTTCGCGTCCAGCTCAATTAAACGCCGACCAAATTTTCGGGTACGACGAAAATCATTTAAGTATCTTAGACAACGACGAC CTATTTGAAGATCTTTCTGAGTTTTGGTTGAGAACCGAACAAGGCTATAATTATAATGGAAATAATTTTTAA
Upstream 100 bases:
>100_bases ACTCTCTGTTTTCTTGCTAGTATTAAACTCATGCTGTTTGTTTATGTATAAAAATTATTGATTGAATGACGAAGCTTGTT GATATGGGGATGAAATTAGA
Downstream 100 bases:
>100_bases GATTAATTGACTATTGGTTGTCCACTATTGATATTGTTTATTTAGACACCACTACCACAGTAAATACTAACTCCTGTAGG AATGCAGACAGCACCGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MRRLLTAIFFSSALLLSSVLSGCSNFRNLSNEIDAIDAYTDQYQIILTEPASGSAVVIQQIKDINKSEVDGYDGIIDSDS IQLQLSRKIHYLLVFDDKNQDLTLQADEPFSVVNLHDHQDNSTVRISLAIDENKAPRAFVNHSLSSLLKVELDLVDIGTV VSLTDPPFKRENAKLGMWQPVTFFFEGNAGLYFLSEYDPTKIPILFVHGINATALDFAPLIEKIDQSKYQIWVFNYPSGL SLVLSSKGLNNLLHTIVTEYKIQQLHVVAHSMGGLIVANCVRQCQIGQLCNFVSSITTISSPFGGVASAKQGVEYSPIVM PAWVDLNPDGKFIAELFGSKTKNHTPHFLAFGYNSGELFNTNSNDGVIDLSSQLSRPAQLNADQIFGYDENHLSILDNDD LFEDLSEFWLRTEQGYNYNGNNF
Sequences:
>Translated_423_residues MRRLLTAIFFSSALLLSSVLSGCSNFRNLSNEIDAIDAYTDQYQIILTEPASGSAVVIQQIKDINKSEVDGYDGIIDSDS IQLQLSRKIHYLLVFDDKNQDLTLQADEPFSVVNLHDHQDNSTVRISLAIDENKAPRAFVNHSLSSLLKVELDLVDIGTV VSLTDPPFKRENAKLGMWQPVTFFFEGNAGLYFLSEYDPTKIPILFVHGINATALDFAPLIEKIDQSKYQIWVFNYPSGL SLVLSSKGLNNLLHTIVTEYKIQQLHVVAHSMGGLIVANCVRQCQIGQLCNFVSSITTISSPFGGVASAKQGVEYSPIVM PAWVDLNPDGKFIAELFGSKTKNHTPHFLAFGYNSGELFNTNSNDGVIDLSSQLSRPAQLNADQIFGYDENHLSILDNDD LFEDLSEFWLRTEQGYNYNGNNF >Mature_423_residues MRRLLTAIFFSSALLLSSVLSGCSNFRNLSNEIDAIDAYTDQYQIILTEPASGSAVVIQQIKDINKSEVDGYDGIIDSDS IQLQLSRKIHYLLVFDDKNQDLTLQADEPFSVVNLHDHQDNSTVRISLAIDENKAPRAFVNHSLSSLLKVELDLVDIGTV VSLTDPPFKRENAKLGMWQPVTFFFEGNAGLYFLSEYDPTKIPILFVHGINATALDFAPLIEKIDQSKYQIWVFNYPSGL SLVLSSKGLNNLLHTIVTEYKIQQLHVVAHSMGGLIVANCVRQCQIGQLCNFVSSITTISSPFGGVASAKQGVEYSPIVM PAWVDLNPDGKFIAELFGSKTKNHTPHFLAFGYNSGELFNTNSNDGVIDLSSQLSRPAQLNADQIFGYDENHLSILDNDD LFEDLSEFWLRTEQGYNYNGNNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47065; Mature: 47065
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLLTAIFFSSALLLSSVLSGCSNFRNLSNEIDAIDAYTDQYQIILTEPASGSAVVIQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHH IKDINKSEVDGYDGIIDSDSIQLQLSRKIHYLLVFDDKNQDLTLQADEPFSVVNLHDHQD HHCCCCHHCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCEEEECCCCEEEEEEECCCC NSTVRISLAIDENKAPRAFVNHSLSSLLKVELDLVDIGTVVSLTDPPFKRENAKLGMWQP CCEEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEECEEEEECCCCCCCCCCCCCCCCC VTFFFEGNAGLYFLSEYDPTKIPILFVHGINATALDFAPLIEKIDQSKYQIWVFNYPSGL EEEEEECCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC SLVLSSKGLNNLLHTIVTEYKIQQLHVVAHSMGGLIVANCVRQCQIGQLCNFVSSITTIS EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC SPFGGVASAKQGVEYSPIVMPAWVDLNPDGKFIAELFGSKTKNHTPHFLAFGYNSGELFN CCCCCCHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEE TNSNDGVIDLSSQLSRPAQLNADQIFGYDENHLSILDNDDLFEDLSEFWLRTEQGYNYNG CCCCCCEEEEHHHCCCCCCCCHHHEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC NNF CCC >Mature Secondary Structure MRRLLTAIFFSSALLLSSVLSGCSNFRNLSNEIDAIDAYTDQYQIILTEPASGSAVVIQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEHHHH IKDINKSEVDGYDGIIDSDSIQLQLSRKIHYLLVFDDKNQDLTLQADEPFSVVNLHDHQD HHCCCCHHCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCEEEECCCCEEEEEEECCCC NSTVRISLAIDENKAPRAFVNHSLSSLLKVELDLVDIGTVVSLTDPPFKRENAKLGMWQP CCEEEEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEECEEEEECCCCCCCCCCCCCCCCC VTFFFEGNAGLYFLSEYDPTKIPILFVHGINATALDFAPLIEKIDQSKYQIWVFNYPSGL EEEEEECCCCEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCC SLVLSSKGLNNLLHTIVTEYKIQQLHVVAHSMGGLIVANCVRQCQIGQLCNFVSSITTIS EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC SPFGGVASAKQGVEYSPIVMPAWVDLNPDGKFIAELFGSKTKNHTPHFLAFGYNSGELFN CCCCCCHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEE TNSNDGVIDLSSQLSRPAQLNADQIFGYDENHLSILDNDDLFEDLSEFWLRTEQGYNYNG CCCCCCEEEEHHHCCCCCCCCHHHEECCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCC NNF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA