Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218710069

Identifier: 218710069

GI number: 218710069

Start: 2244367

End: 2244726

Strand: Direct

Name: 218710069

Synonym: VS_2089

Alternate gene names: NA

Gene position: 2244367-2244726 (Clockwise)

Preceding gene: 218710068

Following gene: 218710070

Centisome position: 68.03

GC content: 45.0

Gene sequence:

>360_bases
ATGCCAAAGTTGATAAGCAAAATTTGGGTACATGCTTTTATGCTATTCGCTATGTTAGTGGCCACCGTCAGTGTGGACAG
TATCGCGAACGCCAATGCTATGCAGGTAACTCAAAATCTATCAACCTTATCGCTGAACACCGATTCCTCATTCGACACCA
GTGACTCATTCCCATATTCCAGCGCGCAACCCAATGTAGAACACCACTGCTGTGGCTCTGTATGCTTGCTTAAAATGCCA
CCGTTGATTGTGTCAGAGTCTTTTGATACCCAAATTGGTTCATTGGCTTTGATCGAGAAAGAGCCTTCACACAAGGCAAT
CATGTCGCCACAAGCTCCTTATCGCCCTCCTATTTCTTAA

Upstream 100 bases:

>100_bases
AACGAGTGATGTATCATGCGCTCGTTCTACGCTTTCCTGTTTAGCGGTTGCAGAATGTGATTCATACCAACCTTAATTCG
GACACAAAGACCAATATTCC

Downstream 100 bases:

>100_bases
TTGTTTGTCCCTGTTTGGCAACGCTTGCCAACGTATTACTAATACAGCTCTATCGCTGTAAACAATGACATCCAAATTTA
GGAAATAACACATGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYSSAQPNVEHHCCGSVCLLKMP
PLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS

Sequences:

>Translated_119_residues
MPKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYSSAQPNVEHHCCGSVCLLKMP
PLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS
>Mature_118_residues
PKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYSSAQPNVEHHCCGSVCLLKMPP
LIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12925; Mature: 12794

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCC
SAQPNVEHHCCGSVCLLKMPPLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS
CCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
PKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCC
SAQPNVEHHCCGSVCLLKMPPLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS
CCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA