| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218710069
Identifier: 218710069
GI number: 218710069
Start: 2244367
End: 2244726
Strand: Direct
Name: 218710069
Synonym: VS_2089
Alternate gene names: NA
Gene position: 2244367-2244726 (Clockwise)
Preceding gene: 218710068
Following gene: 218710070
Centisome position: 68.03
GC content: 45.0
Gene sequence:
>360_bases ATGCCAAAGTTGATAAGCAAAATTTGGGTACATGCTTTTATGCTATTCGCTATGTTAGTGGCCACCGTCAGTGTGGACAG TATCGCGAACGCCAATGCTATGCAGGTAACTCAAAATCTATCAACCTTATCGCTGAACACCGATTCCTCATTCGACACCA GTGACTCATTCCCATATTCCAGCGCGCAACCCAATGTAGAACACCACTGCTGTGGCTCTGTATGCTTGCTTAAAATGCCA CCGTTGATTGTGTCAGAGTCTTTTGATACCCAAATTGGTTCATTGGCTTTGATCGAGAAAGAGCCTTCACACAAGGCAAT CATGTCGCCACAAGCTCCTTATCGCCCTCCTATTTCTTAA
Upstream 100 bases:
>100_bases AACGAGTGATGTATCATGCGCTCGTTCTACGCTTTCCTGTTTAGCGGTTGCAGAATGTGATTCATACCAACCTTAATTCG GACACAAAGACCAATATTCC
Downstream 100 bases:
>100_bases TTGTTTGTCCCTGTTTGGCAACGCTTGCCAACGTATTACTAATACAGCTCTATCGCTGTAAACAATGACATCCAAATTTA GGAAATAACACATGAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYSSAQPNVEHHCCGSVCLLKMP PLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS
Sequences:
>Translated_119_residues MPKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYSSAQPNVEHHCCGSVCLLKMP PLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS >Mature_118_residues PKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYSSAQPNVEHHCCGSVCLLKMPP LIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12925; Mature: 12794
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCC SAQPNVEHHCCGSVCLLKMPPLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS CCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC >Mature Secondary Structure PKLISKIWVHAFMLFAMLVATVSVDSIANANAMQVTQNLSTLSLNTDSSFDTSDSFPYS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCCCCCC SAQPNVEHHCCGSVCLLKMPPLIVSESFDTQIGSLALIEKEPSHKAIMSPQAPYRPPIS CCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA