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The map label for this gene is ycfM [C]

Identifier: 218710056

GI number: 218710056

Start: 2228672

End: 2229262

Strand: Reverse

Name: ycfM [C]

Synonym: VS_2076

Alternate gene names: 218710056

Gene position: 2229262-2228672 (Counterclockwise)

Preceding gene: 218710057

Following gene: 218710055

Centisome position: 67.57

GC content: 42.98

Gene sequence:

>591_bases
ATGAAAAAGAGTGTCATTGCGCTACTAGGTTTAGCGGTTATTTTAGGCGGTTGTTCAAACAAGGTAAGCTACGGTGATGC
ACAATCAGTAGAAACCACGACAATCGATTTCGGTTCAACTGACCTTCAAACGATTGCGGGCGAAATGGTCGATAGCATGA
TGGCGTCTGGTTCTGTGTCTTACATTACTCGTGATCAACGTCCAATCGTGTTCGTAGAGCGAATCAAGAACAAAACAAGT
GAGCACATCGATACTGAGTCAATCACTGATACCATCAGTACTAAAATGCTGAACTCTGGTAAGTTCCGTTTCGTTGATAT
GGACCGTGTAGAGTCTGTTCGTGAACAGTTGAACTTCCAAAATAACGATGAGCTTGTAAATCAAAGCTCAGCAATCCAAT
TTGGTAAAATGGTTGGTGCTCAGTACATGTTGTACGGCAACCTATCAAGCATCGTTAAGAAAGCGGGCAGCGACGAAGAC
GTATACTACAAAATGACTATGCGCCTAATGGATCTTGAGTCTGGCTTGATTGAGTGGGCTGACGAGACTGAAATCCGTAA
GCAACAATCTAAGAGCTTACTGGGTTTTTAA

Upstream 100 bases:

>100_bases
GCTTTATAGCAAAGACGAGATAGAACGGGTCTAAGGATTCGAAAATACAAAAATTTAAGAGAGTGGGTAACCCCGCTTAG
TGATTAGTTAAGGAAACAAA

Downstream 100 bases:

>100_bases
TTTAGCTTATTGAGCTTCTTAAATGGTTTAGTGTGCTATTAACTTGGCTTAGTCATGCCTCAACGCAGTACATGTTATTT
GCTGTGATTGGTATTAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane Lipoprotein Lipid Attachment Site

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKSVIALLGLAVILGGCSNKVSYGDAQSVETTTIDFGSTDLQTIAGEMVDSMMASGSVSYITRDQRPIVFVERIKNKTS
EHIDTESITDTISTKMLNSGKFRFVDMDRVESVREQLNFQNNDELVNQSSAIQFGKMVGAQYMLYGNLSSIVKKAGSDED
VYYKMTMRLMDLESGLIEWADETEIRKQQSKSLLGF

Sequences:

>Translated_196_residues
MKKSVIALLGLAVILGGCSNKVSYGDAQSVETTTIDFGSTDLQTIAGEMVDSMMASGSVSYITRDQRPIVFVERIKNKTS
EHIDTESITDTISTKMLNSGKFRFVDMDRVESVREQLNFQNNDELVNQSSAIQFGKMVGAQYMLYGNLSSIVKKAGSDED
VYYKMTMRLMDLESGLIEWADETEIRKQQSKSLLGF
>Mature_196_residues
MKKSVIALLGLAVILGGCSNKVSYGDAQSVETTTIDFGSTDLQTIAGEMVDSMMASGSVSYITRDQRPIVFVERIKNKTS
EHIDTESITDTISTKMLNSGKFRFVDMDRVESVREQLNFQNNDELVNQSSAIQFGKMVGAQYMLYGNLSSIVKKAGSDED
VYYKMTMRLMDLESGLIEWADETEIRKQQSKSLLGF

Specific function: Unknown

COG id: COG3417

COG function: function code R; Collagen-binding surface adhesin SpaP (antigen I/II family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787348, Length=120, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21831; Mature: 21831

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVIALLGLAVILGGCSNKVSYGDAQSVETTTIDFGSTDLQTIAGEMVDSMMASGSVS
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEE
YITRDQRPIVFVERIKNKTSEHIDTESITDTISTKMLNSGKFRFVDMDRVESVREQLNFQ
EEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCC
NNDELVNQSSAIQFGKMVGAQYMLYGNLSSIVKKAGSDEDVYYKMTMRLMDLESGLIEWA
CCHHHHCHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
DETEIRKQQSKSLLGF
CHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKSVIALLGLAVILGGCSNKVSYGDAQSVETTTIDFGSTDLQTIAGEMVDSMMASGSVS
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEE
YITRDQRPIVFVERIKNKTSEHIDTESITDTISTKMLNSGKFRFVDMDRVESVREQLNFQ
EEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCC
NNDELVNQSSAIQFGKMVGAQYMLYGNLSSIVKKAGSDEDVYYKMTMRLMDLESGLIEWA
CCHHHHCHHHHHHHHHHHHHHHHEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
DETEIRKQQSKSLLGF
CHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA