| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709988
Identifier: 218709988
GI number: 218709988
Start: 2154015
End: 2154206
Strand: Reverse
Name: 218709988
Synonym: VS_2007
Alternate gene names: NA
Gene position: 2154206-2154015 (Counterclockwise)
Preceding gene: 218709989
Following gene: 218709986
Centisome position: 65.29
GC content: 37.5
Gene sequence:
>192_bases ATGATGAAAAAGCAGATAAACAAGACAATAGGTACACAAGTTACAGCAAGGCTAACGGCTATAGGACCTAAAAGTAGGTT TTTGGAGAGCCTAGATTTTTCAACAATTGAGCTTGCCCCAACGATGATCATTGCAAATAGCCACAGTAAATTGACCCATA AGCTATTTAAGGTGAACAAGTATTCTAGGTAA
Upstream 100 bases:
>100_bases CAAGTTCTGCAATGCCACGATATTACTGCTTAAGCTATTACCTAACAGCATCCCTGCAATAGGGATAAGGTACTGTGCGT TAAAAACAGGTGTCGGTTTA
Downstream 100 bases:
>100_bases AGTCCCACTAGAAATAGCTGAACAACCATACGGATTATGCTGACAGAAGCCTCTTTGCCAAGGCCGAGTTTTAACTTGTA GTTGATGGTAATGGGTAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MMKKQINKTIGTQVTARLTAIGPKSRFLESLDFSTIELAPTMIIANSHSKLTHKLFKVNKYSR
Sequences:
>Translated_63_residues MMKKQINKTIGTQVTARLTAIGPKSRFLESLDFSTIELAPTMIIANSHSKLTHKLFKVNKYSR >Mature_63_residues MMKKQINKTIGTQVTARLTAIGPKSRFLESLDFSTIELAPTMIIANSHSKLTHKLFKVNKYSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7136; Mature: 7136
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKQINKTIGTQVTARLTAIGPKSRFLESLDFSTIELAPTMIIANSHSKLTHKLFKVNK CCHHHHHHHHCCHHEEHEEECCCHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHCC YSR CCC >Mature Secondary Structure MMKKQINKTIGTQVTARLTAIGPKSRFLESLDFSTIELAPTMIIANSHSKLTHKLFKVNK CCHHHHHHHHCCHHEEHEEECCCHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHCC YSR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA