| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cls [H]
Identifier: 218709962
GI number: 218709962
Start: 2126899
End: 2128353
Strand: Direct
Name: cls [H]
Synonym: VS_1981
Alternate gene names: 218709962
Gene position: 2126899-2128353 (Clockwise)
Preceding gene: 218709957
Following gene: 218709963
Centisome position: 64.47
GC content: 45.7
Gene sequence:
>1455_bases GTGGAAAAGCTCTACCATTTTTTAACTTTAGCTTCTGTCGCTTTATACTGGGTCCTTGTCGCCGGTGTGACTTTTCGTGT CGTACTAAAACGACGCTCTGTCAGCGTTTCTCTCGCATGGTTGATGGTTATCTACATTATCCCTATTGTTGGCGTCGCTT GTTACTTCCTTTTCGGAGAGCTAAATCTTGGTAGAAAGAGGGCTGAGCGGGCACATCGCATGTTTACGCCTTTTGGTGAT TGGTTCCGCCAATTAAATGATTGCCAAGTCCACCTTCCAGGTAAAGTCGGCTCGCCTATCCACAAAATTGATGAGCTTTG TAACAATCGGATGGGCATTCCAGCGCTCAGCGGAAACACACTTTCACTGCAGGCTTCTCCTAATGAGATCCTACACGCAA TTATCGAAGATATAGAAAACGCCCAGACTAGTATCAAAATGGTTTTCTATATTTGGCACCCCGGCGGCTTAACTGACTCC GTTGCTTCCGCACTTATTCGAGCAGCAAAACGTGGTGTCGATGTTAAAGTTTTACTCGATTCTGCAGGTAGCCCGCGCTT TTTCAAAAGTCACTGGCGTTCAATGATGAAAGACGCTGGCGTTCACGTTGTCCAAGCATTAGAGGTTAGTCCTTGGCGTA TTTTCTTACGCCGTTTAGATCTAAGGCAGCACCGGAAGATCATCGTGATTGATGAGTCCATCGCCTATACCGGGTCAATG AATATGGTAGATCCAGCTCATTTCAAACAGAGCTCAGGTGTCGGCCAATGGATTGATGTCATGGTTCGCGTCACTGGGCC AACCGTTAACGTGTTGTCAGCAATTCATGGTTGGGATTGGGAAGTGGAAACCGGTGAACGCATTCTTCCTGATTTACCAG AGTGCCCGGTTGAAGAAATCATGACGCATCATCCAGTTCAAGTAGTGCCATCTGGGCCGGGCATGCCGGAGTATTTGATT CTGCAAGTTCTTACTATTGCGATTAATCAAGCAAACCATTCAGTTCGTATTACAACACCCTACTTTGTACCGAGTGCCGA CTTATTAGAAACACTCAAAATGACGGCACAACGTGGTGTCAGCGTAGAATTAATCATTCCACATAACAACGATTCATTAA TGGTTAAATGGGCTTCTCGCGCCTTCTATACCGAACTGCTTGAAGCCGGAGTGAAGATATATGAGTTTTACGGCGGGCTT CTTCACACCAAATCGGTAGTGATTGATGAAGAGTTTTGCTTAATCGGAACGGTCAATATCGACATGCGCAGCCTATGGCT TAACTTCGAAGTAACGCTAGCCGTTGATGATGTGCACTTCACCAAGCAACTGTTTGATTTGCAGCAATCCTATATTGAAT CATCTCATCCAGTGGAATTGGAGCAATGGGAGCAGAGAAACCTACGCAACCGCTTCTTCGAAAGGTTGTTTTACTTATTC AACCCGCTGCTTTAA
Upstream 100 bases:
>100_bases TTACAGCTTTTGCTCTATTTTGTAAATAGTTGATTCCTTAAATTCCCATATCCGTAAAATAGCATTACTATCTAAGTGTC TCTTTTTTCGAGTATTCAAT
Downstream 100 bases:
>100_bases TTCCATCAATGCGTCCACCGCGGCTCATCACTCGCCGACTATCGGATTTTAAACCTTTCACGATAAACGACGTGGAAGGT TAAAAAGCAAAAGAAAAGCG
Product: cardiolipin synthetase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MEKLYHFLTLASVALYWVLVAGVTFRVVLKRRSVSVSLAWLMVIYIIPIVGVACYFLFGELNLGRKRAERAHRMFTPFGD WFRQLNDCQVHLPGKVGSPIHKIDELCNNRMGIPALSGNTLSLQASPNEILHAIIEDIENAQTSIKMVFYIWHPGGLTDS VASALIRAAKRGVDVKVLLDSAGSPRFFKSHWRSMMKDAGVHVVQALEVSPWRIFLRRLDLRQHRKIIVIDESIAYTGSM NMVDPAHFKQSSGVGQWIDVMVRVTGPTVNVLSAIHGWDWEVETGERILPDLPECPVEEIMTHHPVQVVPSGPGMPEYLI LQVLTIAINQANHSVRITTPYFVPSADLLETLKMTAQRGVSVELIIPHNNDSLMVKWASRAFYTELLEAGVKIYEFYGGL LHTKSVVIDEEFCLIGTVNIDMRSLWLNFEVTLAVDDVHFTKQLFDLQQSYIESSHPVELEQWEQRNLRNRFFERLFYLF NPLL
Sequences:
>Translated_484_residues MEKLYHFLTLASVALYWVLVAGVTFRVVLKRRSVSVSLAWLMVIYIIPIVGVACYFLFGELNLGRKRAERAHRMFTPFGD WFRQLNDCQVHLPGKVGSPIHKIDELCNNRMGIPALSGNTLSLQASPNEILHAIIEDIENAQTSIKMVFYIWHPGGLTDS VASALIRAAKRGVDVKVLLDSAGSPRFFKSHWRSMMKDAGVHVVQALEVSPWRIFLRRLDLRQHRKIIVIDESIAYTGSM NMVDPAHFKQSSGVGQWIDVMVRVTGPTVNVLSAIHGWDWEVETGERILPDLPECPVEEIMTHHPVQVVPSGPGMPEYLI LQVLTIAINQANHSVRITTPYFVPSADLLETLKMTAQRGVSVELIIPHNNDSLMVKWASRAFYTELLEAGVKIYEFYGGL LHTKSVVIDEEFCLIGTVNIDMRSLWLNFEVTLAVDDVHFTKQLFDLQQSYIESSHPVELEQWEQRNLRNRFFERLFYLF NPLL >Mature_484_residues MEKLYHFLTLASVALYWVLVAGVTFRVVLKRRSVSVSLAWLMVIYIIPIVGVACYFLFGELNLGRKRAERAHRMFTPFGD WFRQLNDCQVHLPGKVGSPIHKIDELCNNRMGIPALSGNTLSLQASPNEILHAIIEDIENAQTSIKMVFYIWHPGGLTDS VASALIRAAKRGVDVKVLLDSAGSPRFFKSHWRSMMKDAGVHVVQALEVSPWRIFLRRLDLRQHRKIIVIDESIAYTGSM NMVDPAHFKQSSGVGQWIDVMVRVTGPTVNVLSAIHGWDWEVETGERILPDLPECPVEEIMTHHPVQVVPSGPGMPEYLI LQVLTIAINQANHSVRITTPYFVPSADLLETLKMTAQRGVSVELIIPHNNDSLMVKWASRAFYTELLEAGVKIYEFYGGL LHTKSVVIDEEFCLIGTVNIDMRSLWLNFEVTLAVDDVHFTKQLFDLQQSYIESSHPVELEQWEQRNLRNRFFERLFYLF NPLL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=490, Percent_Identity=50.8163265306122, Blast_Score=518, Evalue=1e-148, Organism=Escherichia coli, GI1787007, Length=349, Percent_Identity=29.7994269340974, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55105; Mature: 55105
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLYHFLTLASVALYWVLVAGVTFRVVLKRRSVSVSLAWLMVIYIIPIVGVACYFLFGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LNLGRKRAERAHRMFTPFGDWFRQLNDCQVHLPGKVGSPIHKIDELCNNRMGIPALSGNT CCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEECCCE LSLQASPNEILHAIIEDIENAQTSIKMVFYIWHPGGLTDSVASALIRAAKRGVDVKVLLD EEEECCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEC SAGSPRFFKSHWRSMMKDAGVHVVQALEVSPWRIFLRRLDLRQHRKIIVIDESIAYTGSM CCCCCHHHHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHHCCEEEEEECCEEECCCC NMVDPAHFKQSSGVGQWIDVMVRVTGPTVNVLSAIHGWDWEVETGERILPDLPECPVEEI CCCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHH MTHHPVQVVPSGPGMPEYLILQVLTIAINQANHSVRITTPYFVPSADLLETLKMTAQRGV HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC SVELIIPHNNDSLMVKWASRAFYTELLEAGVKIYEFYGGLLHTKSVVIDEEFCLIGTVNI EEEEEEECCCCEEEEEEHHHHHHHHHHHCCHHHHHHHCCHHHCCEEEEECCEEEEEEEEC DMRSLWLNFEVTLAVDDVHFTKQLFDLQQSYIESSHPVELEQWEQRNLRNRFFERLFYLF EEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH NPLL CCCC >Mature Secondary Structure MEKLYHFLTLASVALYWVLVAGVTFRVVLKRRSVSVSLAWLMVIYIIPIVGVACYFLFGE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LNLGRKRAERAHRMFTPFGDWFRQLNDCQVHLPGKVGSPIHKIDELCNNRMGIPALSGNT CCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCEECCCE LSLQASPNEILHAIIEDIENAQTSIKMVFYIWHPGGLTDSVASALIRAAKRGVDVKVLLD EEEECCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEC SAGSPRFFKSHWRSMMKDAGVHVVQALEVSPWRIFLRRLDLRQHRKIIVIDESIAYTGSM CCCCCHHHHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHHHHCCEEEEEECCEEECCCC NMVDPAHFKQSSGVGQWIDVMVRVTGPTVNVLSAIHGWDWEVETGERILPDLPECPVEEI CCCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHH MTHHPVQVVPSGPGMPEYLILQVLTIAINQANHSVRITTPYFVPSADLLETLKMTAQRGV HCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC SVELIIPHNNDSLMVKWASRAFYTELLEAGVKIYEFYGGLLHTKSVVIDEEFCLIGTVNI EEEEEEECCCCEEEEEEHHHHHHHHHHHCCHHHHHHHCCHHHCCEEEEECCEEEEEEEEC DMRSLWLNFEVTLAVDDVHFTKQLFDLQQSYIESSHPVELEQWEQRNLRNRFFERLFYLF EEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH NPLL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA