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The map label for this gene is 218709856

Identifier: 218709856

GI number: 218709856

Start: 2017138

End: 2018304

Strand: Direct

Name: 218709856

Synonym: VS_1869

Alternate gene names: NA

Gene position: 2017138-2018304 (Clockwise)

Preceding gene: 218709852

Following gene: 218709857

Centisome position: 61.14

GC content: 46.27

Gene sequence:

>1167_bases
TTGGAGGCTAGCATAAATAAAGATAGCATAATTTTTATTGGCTTAGATACGCAGAAGTCATTTATTCAAGTCACTGTATT
ACAAGAACATCGTGGGGCAAATCCACTACACCTTGGTCGTATTAAATCGAATAAGTCCGCGTTGATTAAATTGGCCAAAC
AGCTGCAATCCAAGTATCCCAAAGCCACTCTGCACTTTGTCTATGAAGCAGGACCATGTGGTTACTGGACTTATCGCTTA
ATGACGAGCCTTGGACACTGCTGCTATGTCGTCGCTCCATCACTTATACCTAAAAAGCCAGGCGATAGAGTTAAAACCGA
CAAACGAGACGCTGCAAAGCTCGCCAAGCTGTTAAAAGCCGAAGAGCTCACACCCATCTATGTACCGGAAGCAGAAGATG
AAGCCATTCGAGACCTCTCGCGTGCCAGAGAAACCGCAATGAAAGATCTCAAAGACGCAAAATTCCAACTCAAAGGCTTT
CTTCTTCGCAATAATATCCAAGCGACGGTGAATGATAACTGGTCTAAAAAGCATCTACGGTGGCTAACCGACCTCATTCT
TCCTCATCATAGTCAGCAAATCGTTTTACAAGAGATGATCATTACCATCAATGAGCGAATGCAACGGCTTCAACGACTCG
ATAATGAACTACTCCATCAAGTCAAAAACTGGCGATACTATCCTGTGGTGAAAGCCATTCAAGCTATGCGTGGAGTCCGG
TTACTCGTAGCACTCGGCACAATAGCCGAACTGGGTGACTTACGACGATTTGATCATCCAAGAAAGCTTATGGCTTACCT
CGGACTCGTTCCAACAGAAAACTCCAGTGGCGGTAAAACTCGTCGTGGCAGCTTAACAAAGTGTGGCAACAGTCGGGCCA
GACGGTTGCTGGTCGAAGGCGCACACACCTATAAGCACAAAGCGAACATCTCTGTAGAGCTCCAACTAAGGCAAGAAGGA
CTGCCTAAAGAGATCGTCGATATCGCTTGGCAGGCCCAGCAAAGGTTATGTCGTCGTTACCAACGACTGCTACAAAAAGG
TAAACACCGAAATGTCGTTGTGGTCGCCATCGCTAGAGAGATGATTGCCTACATCTGGGCGATTGCTCGTGAAGTTGTCA
TCAGCGATGTGGATCCTAAAACTCGAATCGCTCGATTACCGGCATGA

Upstream 100 bases:

>100_bases
AGTACGCATAGACATAATGACCCCCACGAAAGGTGCTAGCCTCCAATATCGTGGGTTAGCTTAAAGCCAGAGCCATAATT
AGTGCGTCAAACAACTAAAT

Downstream 100 bases:

>100_bases
AGACAGAATTAGTGTTATCGCATTGGATAAAGCATCGGGAGTGGCACAAACACCGACGGCGTTAGGACGGCAATATAGCT
TCGGCTATATTGAACCACGA

Product: ISVisp2 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MEASINKDSIIFIGLDTQKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATLHFVYEAGPCGYWTYRL
MTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELTPIYVPEAEDEAIRDLSRARETAMKDLKDAKFQLKGF
LLRNNIQATVNDNWSKKHLRWLTDLILPHHSQQIVLQEMIITINERMQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVR
LLVALGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTYKHKANISVELQLRQEG
LPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAYIWAIAREVVISDVDPKTRIARLPA

Sequences:

>Translated_388_residues
MEASINKDSIIFIGLDTQKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATLHFVYEAGPCGYWTYRL
MTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELTPIYVPEAEDEAIRDLSRARETAMKDLKDAKFQLKGF
LLRNNIQATVNDNWSKKHLRWLTDLILPHHSQQIVLQEMIITINERMQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVR
LLVALGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTYKHKANISVELQLRQEG
LPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAYIWAIAREVVISDVDPKTRIARLPA
>Mature_388_residues
MEASINKDSIIFIGLDTQKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYPKATLHFVYEAGPCGYWTYRL
MTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKAEELTPIYVPEAEDEAIRDLSRARETAMKDLKDAKFQLKGF
LLRNNIQATVNDNWSKKHLRWLTDLILPHHSQQIVLQEMIITINERMQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVR
LLVALGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEGAHTYKHKANISVELQLRQEG
LPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIAREMIAYIWAIAREVVISDVDPKTRIARLPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 44436; Mature: 44436

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEASINKDSIIFIGLDTQKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYP
CCCCCCCCCEEEEEECCCCCCEEEEEEHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCC
KATLHFVYEAGPCGYWTYRLMTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKA
CEEEEEEEECCCCCHHHHHHHHHHCCHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHH
EELTPIYVPEAEDEAIRDLSRARETAMKDLKDAKFQLKGFLLRNNIQATVNDNWSKKHLR
HCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
WLTDLILPHHSQQIVLQEMIITINERMQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLVALGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEG
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHC
AHTYKHKANISVELQLRQEGLPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIARE
CHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
MIAYIWAIAREVVISDVDPKTRIARLPA
HHHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MEASINKDSIIFIGLDTQKSFIQVTVLQEHRGANPLHLGRIKSNKSALIKLAKQLQSKYP
CCCCCCCCCEEEEEECCCCCCEEEEEEHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCC
KATLHFVYEAGPCGYWTYRLMTSLGHCCYVVAPSLIPKKPGDRVKTDKRDAAKLAKLLKA
CEEEEEEEECCCCCHHHHHHHHHHCCHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHH
EELTPIYVPEAEDEAIRDLSRARETAMKDLKDAKFQLKGFLLRNNIQATVNDNWSKKHLR
HCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHH
WLTDLILPHHSQQIVLQEMIITINERMQRLQRLDNELLHQVKNWRYYPVVKAIQAMRGVR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LLVALGTIAELGDLRRFDHPRKLMAYLGLVPTENSSGGKTRRGSLTKCGNSRARRLLVEG
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHC
AHTYKHKANISVELQLRQEGLPKEIVDIAWQAQQRLCRRYQRLLQKGKHRNVVVVAIARE
CHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
MIAYIWAIAREVVISDVDPKTRIARLPA
HHHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]