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The map label for this gene is ybjT [H]

Identifier: 218709837

GI number: 218709837

Start: 1998887

End: 2000323

Strand: Direct

Name: ybjT [H]

Synonym: VS_1850

Alternate gene names: 218709837

Gene position: 1998887-2000323 (Clockwise)

Preceding gene: 218709831

Following gene: 218709841

Centisome position: 60.59

GC content: 46.97

Gene sequence:

>1437_bases
ATGAAGAAAGTACTGGTTTTAGGCGCTTCTGGATATGTTGGTTCGCAGCTCCTCCCTATCCTGCTTGAGCAAGGCTATCA
AGTCACAGCTGCAGCAAGGCATATCGACTATTTAAAAGCACGAACAGAGCCTCACGACAACTTGTCACTTGAATACCTTG
ATCTCGCAGATCAAGCTGCGACACAAGCGCTCGTCCCTGACTTTGACCTTATTTTCTTTCTTGTACATGGAATGGCTGAA
GGCCATGATTTTATTGACTACGAATTGAACCTAGCACGTAACTTTGTTTCGGCTCTTGGGCCAAAAAACCAACACGTCAT
CTACCTCAGTTCGCTTCAGCCCCAAACTGGTGATTCAGAGCATCTTCAAGCGAGAAAACAAACCGGACAACTGCTTCGTA
AAGGACCAGTACCGGTGACCGAACTTCAAGCAGGCGTCATCATTGGCCCTGGCTCTGCGGCGTTCGAGATCATGCGAGAC
TTCGTGTACAACTTACCTATCATGATTGCGCCCAAATGGGTCGACTCTAAAGCCAACCCTATTGCCTTGCAGAACCTGAA
CCACTATCTACTAAAACTCGCACAAGACACGCCTAGCGAAAGCCAAACCTTCGAGGTTGGCGGGCCAGATATTGTCTCTT
ATCGAAACCAATTTGCACACATTGCCAAAACAGCCGATCGTCCACTCAGGCTGTGGGCGACATCACTTCTCACACCTTCT
ATGGCGTCTTATTGGTTGGGCGTGGTGACTTCTGTTCCGTCCAACATAGGCAGAGCGCTTCTCGCGGGCTTAAAGCATGA
CTTTATTGCCAGTTCGACCATCATTAGAGAAAAGTACCCTCAGAAACTTATCTCATTCGAAAGTATGGTTGAGCAAGCGA
TTCATTCTGAAGGCAACTTCGTAAAAAGTAATGTTTGGGGCTTTGACAAAACCGCCTTCAAGCGCTGGCAAGCTGGGTAT
GGCTATTACCCGAAGAAAACAGAGGCAAGTATCACCTCAAGCGCATCCTTAGATTCCCTCTGGCATGTTGCACAGCAGAT
AGGAAGCCCAAAACAGGGTTACTTCTTCGCTAACGCTTTATGGCGCACACGCGAATGGTTAGATCTTATCTTTGGCGGTG
GTGTACCTGTTCGACAAATGCCAGAAGGCCCTAACCTAAAAGTCGGTGACAAAATTGATTCTTGGAAGGTTATTCGCTGT
GAAGAGAATCAGTTTCTATCTCTGCTTTTCGGTATGAAAGGCCCCGGTTTGGGGAGACTCGAAATTACCGTATCTGACCA
CGGTGATTATCGTGAACTGAACATTTCAGCTTGGTGGCATCCAAAAGGCTTTTTAGGCTTACTGTATTGGTTCGCGATGA
TGCCAGCTCACCTATTTATCTTTAAAGGCATGGTGAAGGCGATTGAGAAGCAAGCTAAAGATCAGATGAAGGATTAA

Upstream 100 bases:

>100_bases
ACATAGAGATACCTAAACGGAACGTATTGATGAATAAAGATAAATATCGCGCTATTATATCAATGTTCGGTTTTTAACCA
CAGAGATAAATGGAGTAACA

Downstream 100 bases:

>100_bases
AGCAGATTCGAGATGCGAAGAAATTAAGAGCTATAGATGAGACTCCCTCCACACCTTCTTGCTAGAAAAAGACCGCCATT
TAGGCGGTCTTTATATTTTT

Product: putative nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKKVLVLGASGYVGSQLLPILLEQGYQVTAAARHIDYLKARTEPHDNLSLEYLDLADQAATQALVPDFDLIFFLVHGMAE
GHDFIDYELNLARNFVSALGPKNQHVIYLSSLQPQTGDSEHLQARKQTGQLLRKGPVPVTELQAGVIIGPGSAAFEIMRD
FVYNLPIMIAPKWVDSKANPIALQNLNHYLLKLAQDTPSESQTFEVGGPDIVSYRNQFAHIAKTADRPLRLWATSLLTPS
MASYWLGVVTSVPSNIGRALLAGLKHDFIASSTIIREKYPQKLISFESMVEQAIHSEGNFVKSNVWGFDKTAFKRWQAGY
GYYPKKTEASITSSASLDSLWHVAQQIGSPKQGYFFANALWRTREWLDLIFGGGVPVRQMPEGPNLKVGDKIDSWKVIRC
EENQFLSLLFGMKGPGLGRLEITVSDHGDYRELNISAWWHPKGFLGLLYWFAMMPAHLFIFKGMVKAIEKQAKDQMKD

Sequences:

>Translated_478_residues
MKKVLVLGASGYVGSQLLPILLEQGYQVTAAARHIDYLKARTEPHDNLSLEYLDLADQAATQALVPDFDLIFFLVHGMAE
GHDFIDYELNLARNFVSALGPKNQHVIYLSSLQPQTGDSEHLQARKQTGQLLRKGPVPVTELQAGVIIGPGSAAFEIMRD
FVYNLPIMIAPKWVDSKANPIALQNLNHYLLKLAQDTPSESQTFEVGGPDIVSYRNQFAHIAKTADRPLRLWATSLLTPS
MASYWLGVVTSVPSNIGRALLAGLKHDFIASSTIIREKYPQKLISFESMVEQAIHSEGNFVKSNVWGFDKTAFKRWQAGY
GYYPKKTEASITSSASLDSLWHVAQQIGSPKQGYFFANALWRTREWLDLIFGGGVPVRQMPEGPNLKVGDKIDSWKVIRC
EENQFLSLLFGMKGPGLGRLEITVSDHGDYRELNISAWWHPKGFLGLLYWFAMMPAHLFIFKGMVKAIEKQAKDQMKD
>Mature_478_residues
MKKVLVLGASGYVGSQLLPILLEQGYQVTAAARHIDYLKARTEPHDNLSLEYLDLADQAATQALVPDFDLIFFLVHGMAE
GHDFIDYELNLARNFVSALGPKNQHVIYLSSLQPQTGDSEHLQARKQTGQLLRKGPVPVTELQAGVIIGPGSAAFEIMRD
FVYNLPIMIAPKWVDSKANPIALQNLNHYLLKLAQDTPSESQTFEVGGPDIVSYRNQFAHIAKTADRPLRLWATSLLTPS
MASYWLGVVTSVPSNIGRALLAGLKHDFIASSTIIREKYPQKLISFESMVEQAIHSEGNFVKSNVWGFDKTAFKRWQAGY
GYYPKKTEASITSSASLDSLWHVAQQIGSPKQGYFFANALWRTREWLDLIFGGGVPVRQMPEGPNLKVGDKIDSWKVIRC
EENQFLSLLFGMKGPGLGRLEITVSDHGDYRELNISAWWHPKGFLGLLYWFAMMPAHLFIFKGMVKAIEKQAKDQMKD

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081793, Length=477, Percent_Identity=46.7505241090147, Blast_Score=431, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 53499; Mature: 53499

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLVLGASGYVGSQLLPILLEQGYQVTAAARHIDYLKARTEPHDNLSLEYLDLADQAA
CCEEEEEECCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHH
TQALVPDFDLIFFLVHGMAEGHDFIDYELNLARNFVSALGPKNQHVIYLSSLQPQTGDSE
HHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
HLQARKQTGQLLRKGPVPVTELQAGVIIGPGSAAFEIMRDFVYNLPIMIAPKWVDSKANP
HHHHHHHHHHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHCCCEEEECHHCCCCCCC
IALQNLNHYLLKLAQDTPSESQTFEVGGPDIVSYRNQFAHIAKTADRPLRLWATSLLTPS
EEHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
MASYWLGVVTSVPSNIGRALLAGLKHDFIASSTIIREKYPQKLISFESMVEQAIHSEGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VKSNVWGFDKTAFKRWQAGYGYYPKKTEASITSSASLDSLWHVAQQIGSPKQGYFFANAL
EECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHH
WRTREWLDLIFGGGVPVRQMPEGPNLKVGDKIDSWKVIRCEENQFLSLLFGMKGPGLGRL
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHCCCCCCCCEE
EITVSDHGDYRELNISAWWHPKGFLGLLYWFAMMPAHLFIFKGMVKAIEKQAKDQMKD
EEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVLVLGASGYVGSQLLPILLEQGYQVTAAARHIDYLKARTEPHDNLSLEYLDLADQAA
CCEEEEEECCCCCHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHH
TQALVPDFDLIFFLVHGMAEGHDFIDYELNLARNFVSALGPKNQHVIYLSSLQPQTGDSE
HHHCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHH
HLQARKQTGQLLRKGPVPVTELQAGVIIGPGSAAFEIMRDFVYNLPIMIAPKWVDSKANP
HHHHHHHHHHHHHCCCCCHHHHCCCEEECCCHHHHHHHHHHHHCCCEEEECHHCCCCCCC
IALQNLNHYLLKLAQDTPSESQTFEVGGPDIVSYRNQFAHIAKTADRPLRLWATSLLTPS
EEHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
MASYWLGVVTSVPSNIGRALLAGLKHDFIASSTIIREKYPQKLISFESMVEQAIHSEGNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VKSNVWGFDKTAFKRWQAGYGYYPKKTEASITSSASLDSLWHVAQQIGSPKQGYFFANAL
EECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEHHHH
WRTREWLDLIFGGGVPVRQMPEGPNLKVGDKIDSWKVIRCEENQFLSLLFGMKGPGLGRL
HHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEECCHHHHHHHHCCCCCCCCEE
EITVSDHGDYRELNISAWWHPKGFLGLLYWFAMMPAHLFIFKGMVKAIEKQAKDQMKD
EEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]