| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709770
Identifier: 218709770
GI number: 218709770
Start: 1908241
End: 1908936
Strand: Reverse
Name: 218709770
Synonym: VS_1782
Alternate gene names: NA
Gene position: 1908936-1908241 (Counterclockwise)
Preceding gene: 218709771
Following gene: 218709769
Centisome position: 57.86
GC content: 41.67
Gene sequence:
>696_bases ATGAAAACAACTCTAGGAACCTTTTTAGCTATTTTTAGCTTTCTACTTTCAGCGACTCTTTTTTCAACCCATGCCCATGC TGCGGCATACGGTGTGTCAGTCGCTTGGAAAACCGACGATGCTCAAGCGGTATTTGAGGTGATGCCTCATCAGAAAAAAG CATTTGCTAACTTAATTGACGCGGGCTTGGTACACGATATGTTCGTATCGGAAAGCTTTATCGGAGACAAGAAATTTCCG ATGATTAAGTTTGTGATTGAAGCGGACAGTGAACAGCACGTTCGAGAGTTGATTGGTAACCTACCATTCCAATTTAAAGA GCTTGTCGAGGTGACTGAAATCAGAGACATCGGTAATAAGTGGTTAAACACTGACGTCGCTTTCAAAAACTACGCAGTCG AACTCGCTTGGACAGAGCCTGAGAATCAATTCATTGTCGATGAGATTATCAGCCAAGATTTACAAATGGTTGTCGATTGG AGCGCTCAAGGTGTGATTACTTCTGCTTACTTAAAACATCAAGAAATAGCTCAAGAGAAGCCAAACCAAAAAGCGATGAT CAGACCCATTTACTCAATGGCAATATTGGCTAAAAACGAAGAACAAGCTCGCGGAGTTGCCAGTCAGTTGAATGCAGTAA AGTTAGGCTTCGCTGAAGTTATGATTAGTGAACTTGGATTCAAACTGGAACTATAA
Upstream 100 bases:
>100_bases ACAAGTGATGAGAAAAGAGCTACCACCTTTAAAAATCGAAGGGGTTTCTGCTGACCCTAACTTGTATGAAATTATTCGCG ACTAATCAGGAAACCACATA
Downstream 100 bases:
>100_bases TTTCGCTAGAACAGAATTGTGACCTCGTTTTCAGATTGCGTAACGACGAGGTCTTAATATAGGACCATGACAAGTTTAGA GTTAAACTTGGCTATGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKTTLGTFLAIFSFLLSATLFSTHAHAAAYGVSVAWKTDDAQAVFEVMPHQKKAFANLIDAGLVHDMFVSESFIGDKKFP MIKFVIEADSEQHVRELIGNLPFQFKELVEVTEIRDIGNKWLNTDVAFKNYAVELAWTEPENQFIVDEIISQDLQMVVDW SAQGVITSAYLKHQEIAQEKPNQKAMIRPIYSMAILAKNEEQARGVASQLNAVKLGFAEVMISELGFKLEL
Sequences:
>Translated_231_residues MKTTLGTFLAIFSFLLSATLFSTHAHAAAYGVSVAWKTDDAQAVFEVMPHQKKAFANLIDAGLVHDMFVSESFIGDKKFP MIKFVIEADSEQHVRELIGNLPFQFKELVEVTEIRDIGNKWLNTDVAFKNYAVELAWTEPENQFIVDEIISQDLQMVVDW SAQGVITSAYLKHQEIAQEKPNQKAMIRPIYSMAILAKNEEQARGVASQLNAVKLGFAEVMISELGFKLEL >Mature_231_residues MKTTLGTFLAIFSFLLSATLFSTHAHAAAYGVSVAWKTDDAQAVFEVMPHQKKAFANLIDAGLVHDMFVSESFIGDKKFP MIKFVIEADSEQHVRELIGNLPFQFKELVEVTEIRDIGNKWLNTDVAFKNYAVELAWTEPENQFIVDEIISQDLQMVVDW SAQGVITSAYLKHQEIAQEKPNQKAMIRPIYSMAILAKNEEQARGVASQLNAVKLGFAEVMISELGFKLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25945; Mature: 25945
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLGTFLAIFSFLLSATLFSTHAHAAAYGVSVAWKTDDAQAVFEVMPHQKKAFANLID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCCCHHHHHHHHHH AGLVHDMFVSESFIGDKKFPMIKFVIEADSEQHVRELIGNLPFQFKELVEVTEIRDIGNK HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH WLNTDVAFKNYAVELAWTEPENQFIVDEIISQDLQMVVDWSAQGVITSAYLKHQEIAQEK HCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PNQKAMIRPIYSMAILAKNEEQARGVASQLNAVKLGFAEVMISELGFKLEL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MKTTLGTFLAIFSFLLSATLFSTHAHAAAYGVSVAWKTDDAQAVFEVMPHQKKAFANLID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHCCCHHHHHHHHHH AGLVHDMFVSESFIGDKKFPMIKFVIEADSEQHVRELIGNLPFQFKELVEVTEIRDIGNK HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH WLNTDVAFKNYAVELAWTEPENQFIVDEIISQDLQMVVDWSAQGVITSAYLKHQEIAQEK HCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PNQKAMIRPIYSMAILAKNEEQARGVASQLNAVKLGFAEVMISELGFKLEL CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA