| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709762
Identifier: 218709762
GI number: 218709762
Start: 1897201
End: 1897695
Strand: Reverse
Name: 218709762
Synonym: VS_1774
Alternate gene names: NA
Gene position: 1897695-1897201 (Counterclockwise)
Preceding gene: 218709763
Following gene: 218709759
Centisome position: 57.52
GC content: 45.86
Gene sequence:
>495_bases ATGAAAAAAACGTTATTGGCTCTAGCACTGCTAGGTGCATCTTCAACAGCGATGGCTGATTCTTGGTTGTACGGCGGCGC AATGGGTGGTCAAAACTCATTAGGTAATCAAGAAGAGACAGCGATGGGTATCCACGTGGGTACGGGCATCCTTCCATTTA TTGGTGTTGAAGCGGGTTACTGGGATCTAGGTTCTTTCGACAGTGTTAAATACGGCAACCAAACACTGACTAAACTAGAC GCAAGCACAACTTACCTAGCAATCAAACCAAGCATCGACTTTGGTCCTCTTCACGTATACGCGAAGGGTGGTCTTCACTC TTATGAGCTTAAAGCGAACGGCTTCAAGCAAGACGAAGTTGATATCATGTACGGTGTAGGCGCAGAATACTTCATCTTTG GCCCACTATCTGTAGGCGCTAGCTACCAAAACTTCAACATGAAAGATGACGACTCAGGCGTTTTCTCTCTAAACGCAACT ATCCACCTACTGTAA
Upstream 100 bases:
>100_bases TGCTTATTGCATTACTAATTGAATAGTTATTACATACAGGGCGACTTGGTGGCAATTCATTACCACGCAAGGCCTGCCAA CAGGACGAAAAAGGTCGAAT
Downstream 100 bases:
>100_bases TTAATCAGTAAGGCGATCGTAAATGGCGGTCGGATAATTGTTTGATGGGTTTATAATACCAATCGTAGTAAATAACTGTT CATCCTAGCTAGTTAAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKKTLLALALLGASSTAMADSWLYGGAMGGQNSLGNQEETAMGIHVGTGILPFIGVEAGYWDLGSFDSVKYGNQTLTKLD ASTTYLAIKPSIDFGPLHVYAKGGLHSYELKANGFKQDEVDIMYGVGAEYFIFGPLSVGASYQNFNMKDDDSGVFSLNAT IHLL
Sequences:
>Translated_164_residues MKKTLLALALLGASSTAMADSWLYGGAMGGQNSLGNQEETAMGIHVGTGILPFIGVEAGYWDLGSFDSVKYGNQTLTKLD ASTTYLAIKPSIDFGPLHVYAKGGLHSYELKANGFKQDEVDIMYGVGAEYFIFGPLSVGASYQNFNMKDDDSGVFSLNAT IHLL >Mature_164_residues MKKTLLALALLGASSTAMADSWLYGGAMGGQNSLGNQEETAMGIHVGTGILPFIGVEAGYWDLGSFDSVKYGNQTLTKLD ASTTYLAIKPSIDFGPLHVYAKGGLHSYELKANGFKQDEVDIMYGVGAEYFIFGPLSVGASYQNFNMKDDDSGVFSLNAT IHLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17491; Mature: 17491
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLLALALLGASSTAMADSWLYGGAMGGQNSLGNQEETAMGIHVGTGILPFIGVEAGY CCHHEEEEEECCCCCCHHCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCC WDLGSFDSVKYGNQTLTKLDASTTYLAIKPSIDFGPLHVYAKGGLHSYELKANGFKQDEV CCCCCCCCEECCCCEEEEECCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCE DIMYGVGAEYFIFGPLSVGASYQNFNMKDDDSGVFSLNATIHLL EEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MKKTLLALALLGASSTAMADSWLYGGAMGGQNSLGNQEETAMGIHVGTGILPFIGVEAGY CCHHEEEEEECCCCCCHHCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCC WDLGSFDSVKYGNQTLTKLDASTTYLAIKPSIDFGPLHVYAKGGLHSYELKANGFKQDEV CCCCCCCCEECCCCEEEEECCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCE DIMYGVGAEYFIFGPLSVGASYQNFNMKDDDSGVFSLNATIHLL EEEEECCCEEEEEECHHCCCCCCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA