Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709748

Identifier: 218709748

GI number: 218709748

Start: 1879946

End: 1880911

Strand: Reverse

Name: 218709748

Synonym: VS_1760

Alternate gene names: NA

Gene position: 1880911-1879946 (Counterclockwise)

Preceding gene: 218709749

Following gene: 218709742

Centisome position: 57.01

GC content: 41.1

Gene sequence:

>966_bases
ATGATAATAATTTTAACTATGTGTTTAGGACGTCCTGCTATGGCTAAGAAAATAATATTCATTCATGGTCGCGCTCAAAA
GCCCGATAAAGCTAACCTTCAAGCACTCTGGTACGAGGCTATAGAGCATGGCTTGCAGCGAGATTGTATCGGCTCAAGTT
CATTACAAGCTTTTAAAGATGTCGATAAACGCTTTGTCTATTACGGTGAACTATCAAACACATTGTTAGACAAACCAACG
GAAGACCCTGCAAGTCGTCAGCAGGCGCTGTCTGAACTCAAAAAGTACAAGACAAGCCAGTTCAATAAAACAACGTATAA
CAAGGTATCTAAAATTGGTTTTCTAAAAGAGGCGTTAGCAGATACTTTTTCATCGCTGTTTGGAAAGCTAGGTGTGGCTG
AGACACTCATAACGAAGGTCGCACCGGACATGGCGCATTATTGGTATGAAGATACCTATTTTGGTAGCGATGTCAGGTAT
AGGCTAATGGTCGAACTGAAGGAAGCTTTTGATAATAAGGATGATGTGATGATTGTATCGCATAGCCTTGGTTCGATGAT
CAGTTATGACGTGTTGTGGAAGCTGTCTCATTACGGAGAGTATAGACACGACTATGGTGCGGATAAGAAGGTCAACTTAT
TGCTTACGCTCGGGTCACCGTTAGGCGATGAAAACGTAAAAGATAGGCTAAAAGGGAGCCGCTTGAAAGGTGAGAAGAAG
TACCCTTTAAACATTCAGCAATGGATAAACATGTCGGCAGAAGATGATTTTATCTCTCATGACAGCAAAATTAGAAATGA
CTTTAAAGATATGCTCAAACTGGATCTGATACCCGGTGGAATGAAAGATATCCACCCAATCTATAACCTCAATATTCGCA
ACGGAAAAAGCAATCCACATGCCTCTATCGGTTATCTCGTTAACCCTAAATTCATCACAGTGCTGGATGAATGGCTCTCT
AGTTAA

Upstream 100 bases:

>100_bases
CGGCCTCATAGTTATATAAATGCTCTATCAACCACCTCTAGATACGTAATTAGTACCACTGTTATTAGTAAGGGCTGACC
GAATCTAGTGGTGCTTTCTA

Downstream 100 bases:

>100_bases
TTTGGTTTTACCATTGCCAATTGCTCGCTTCTCGTTCGTTGAAACTTAGATAAAACAAGGCCTCGCAAGTGCGAGGCCTT
GTTAGACTCGTTCAACACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MIIILTMCLGRPAMAKKIIFIHGRAQKPDKANLQALWYEAIEHGLQRDCIGSSSLQAFKDVDKRFVYYGELSNTLLDKPT
EDPASRQQALSELKKYKTSQFNKTTYNKVSKIGFLKEALADTFSSLFGKLGVAETLITKVAPDMAHYWYEDTYFGSDVRY
RLMVELKEAFDNKDDVMIVSHSLGSMISYDVLWKLSHYGEYRHDYGADKKVNLLLTLGSPLGDENVKDRLKGSRLKGEKK
YPLNIQQWINMSAEDDFISHDSKIRNDFKDMLKLDLIPGGMKDIHPIYNLNIRNGKSNPHASIGYLVNPKFITVLDEWLS
S

Sequences:

>Translated_321_residues
MIIILTMCLGRPAMAKKIIFIHGRAQKPDKANLQALWYEAIEHGLQRDCIGSSSLQAFKDVDKRFVYYGELSNTLLDKPT
EDPASRQQALSELKKYKTSQFNKTTYNKVSKIGFLKEALADTFSSLFGKLGVAETLITKVAPDMAHYWYEDTYFGSDVRY
RLMVELKEAFDNKDDVMIVSHSLGSMISYDVLWKLSHYGEYRHDYGADKKVNLLLTLGSPLGDENVKDRLKGSRLKGEKK
YPLNIQQWINMSAEDDFISHDSKIRNDFKDMLKLDLIPGGMKDIHPIYNLNIRNGKSNPHASIGYLVNPKFITVLDEWLS
S
>Mature_321_residues
MIIILTMCLGRPAMAKKIIFIHGRAQKPDKANLQALWYEAIEHGLQRDCIGSSSLQAFKDVDKRFVYYGELSNTLLDKPT
EDPASRQQALSELKKYKTSQFNKTTYNKVSKIGFLKEALADTFSSLFGKLGVAETLITKVAPDMAHYWYEDTYFGSDVRY
RLMVELKEAFDNKDDVMIVSHSLGSMISYDVLWKLSHYGEYRHDYGADKKVNLLLTLGSPLGDENVKDRLKGSRLKGEKK
YPLNIQQWINMSAEDDFISHDSKIRNDFKDMLKLDLIPGGMKDIHPIYNLNIRNGKSNPHASIGYLVNPKFITVLDEWLS
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36679; Mature: 36679

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIILTMCLGRPAMAKKIIFIHGRAQKPDKANLQALWYEAIEHGLQRDCIGSSSLQAFKD
CEEEEEEHHCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VDKRFVYYGELSNTLLDKPTEDPASRQQALSELKKYKTSQFNKTTYNKVSKIGFLKEALA
HHHHEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DTFSSLFGKLGVAETLITKVAPDMAHYWYEDTYFGSDVRYRLMVELKEAFDNKDDVMIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCCCEEEEE
HSLGSMISYDVLWKLSHYGEYRHDYGADKKVNLLLTLGSPLGDENVKDRLKGSRLKGEKK
CHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCC
YPLNIQQWINMSAEDDFISHDSKIRNDFKDMLKLDLIPGGMKDIHPIYNLNIRNGKSNPH
CCCCHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCC
ASIGYLVNPKFITVLDEWLSS
CEEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MIIILTMCLGRPAMAKKIIFIHGRAQKPDKANLQALWYEAIEHGLQRDCIGSSSLQAFKD
CEEEEEEHHCCHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VDKRFVYYGELSNTLLDKPTEDPASRQQALSELKKYKTSQFNKTTYNKVSKIGFLKEALA
HHHHEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
DTFSSLFGKLGVAETLITKVAPDMAHYWYEDTYFGSDVRYRLMVELKEAFDNKDDVMIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHCCCCCEEEEE
HSLGSMISYDVLWKLSHYGEYRHDYGADKKVNLLLTLGSPLGDENVKDRLKGSRLKGEKK
CHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCC
YPLNIQQWINMSAEDDFISHDSKIRNDFKDMLKLDLIPGGMKDIHPIYNLNIRNGKSNPH
CCCCHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCC
ASIGYLVNPKFITVLDEWLSS
CEEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA