| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709747
Identifier: 218709747
GI number: 218709747
Start: 1879435
End: 1879830
Strand: Direct
Name: 218709747
Synonym: VS_1759
Alternate gene names: NA
Gene position: 1879435-1879830 (Clockwise)
Preceding gene: 218709746
Following gene: 218709750
Centisome position: 56.96
GC content: 41.41
Gene sequence:
>396_bases TTGATATTCAAGGCTAGCGATACTCAACGTATGTCGTTATTGGGAGTGAGTAAAACGTTGATGGAAGTGGCCTTTCGGTG TGCTGCACTGAGCCGCTTCGAAGCTGAGCAAAACGAGCTAACGATTAGGGGAAAGGAAGGTATTAAAAGAAGCGTTAAAG CACTTATCGGGCAGTTGAATAACAATGACGATTTGCTTGAACCTGACTTCTCAACATTGTACCTGCACGTCGCATTAGAT TACGTCTTATTCAGGCATGCTAATTTGCTTTCAGCAGAAGAGCGCGACATCCTCACTACTGCCTTACATAATTCGTCTTT TAAAGACACATTGGCAAAACTTAGCCTAGAGTCGCTTTCAAAAAAGCTTAACTATTGCGAATACAAAAATTCTTAA
Upstream 100 bases:
>100_bases TTAAGCTTTGTTTTCTTAGTATTGACTACCGCTACATTGCCACCATCAAAACTAAGCGGGCTGTTTAAACGGTTAGCGAT TCGTACTTAATTATGACTAA
Downstream 100 bases:
>100_bases TCACTTTGAACAGTGTTGTGTTGAACGAGTCTAACAAGGCCTCGCACTTGCGAGGCCTTGTTTTATCTAAGTTTCAACGA ACGAGAAGCGAGCAATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MIFKASDTQRMSLLGVSKTLMEVAFRCAALSRFEAEQNELTIRGKEGIKRSVKALIGQLNNNDDLLEPDFSTLYLHVALD YVLFRHANLLSAEERDILTTALHNSSFKDTLAKLSLESLSKKLNYCEYKNS
Sequences:
>Translated_131_residues MIFKASDTQRMSLLGVSKTLMEVAFRCAALSRFEAEQNELTIRGKEGIKRSVKALIGQLNNNDDLLEPDFSTLYLHVALD YVLFRHANLLSAEERDILTTALHNSSFKDTLAKLSLESLSKKLNYCEYKNS >Mature_131_residues MIFKASDTQRMSLLGVSKTLMEVAFRCAALSRFEAEQNELTIRGKEGIKRSVKALIGQLNNNDDLLEPDFSTLYLHVALD YVLFRHANLLSAEERDILTTALHNSSFKDTLAKLSLESLSKKLNYCEYKNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14832; Mature: 14832
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFKASDTQRMSLLGVSKTLMEVAFRCAALSRFEAEQNELTIRGKEGIKRSVKALIGQLN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCC NNDDLLEPDFSTLYLHVALDYVLFRHANLLSAEERDILTTALHNSSFKDTLAKLSLESLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH KKLNYCEYKNS HHHHHHCCCCC >Mature Secondary Structure MIFKASDTQRMSLLGVSKTLMEVAFRCAALSRFEAEQNELTIRGKEGIKRSVKALIGQLN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCC NNDDLLEPDFSTLYLHVALDYVLFRHANLLSAEERDILTTALHNSSFKDTLAKLSLESLS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH KKLNYCEYKNS HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA