Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218709729

Identifier: 218709729

GI number: 218709729

Start: 1864931

End: 1865128

Strand: Reverse

Name: 218709729

Synonym: VS_1740

Alternate gene names: NA

Gene position: 1865128-1864931 (Counterclockwise)

Preceding gene: 218709730

Following gene: 218709727

Centisome position: 56.53

GC content: 47.98

Gene sequence:

>198_bases
ATGACCTTTTTGTTGACGCTATTGGGGTTTGTCGGAGTCGTTACACTGATGGCGATAGGCGTGATTTTTTCGCGCAAGCC
AATCAAAGGCAGTTGTGGAGGACTCGCACAGTTAGACATTGAGCGCGAATGCAATTGCAAGGATGTGTGTGAAGGGCAGA
GTCGAAAGCTGTATCAGATCTCTGAGCCATCAAGCTAA

Upstream 100 bases:

>100_bases
GGTGTAGCAATAAAACGTGCGGCGAGAAAGGGCACAAAAAACAAGCTTCGATTTTAATGGCACAGCCTAATCAGCTAGGC
GCTATTCGAGGGTTCCGTAA

Downstream 100 bases:

>100_bases
GTATCGAGAATTCACTGTCGTTGAGCTAGCTAACGTTGGGCTAGTTCGCGAGTTAAGCGCTTTGAATCACCAACGCGTGA
CCGTTGACGATGCACTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MTFLLTLLGFVGVVTLMAIGVIFSRKPIKGSCGGLAQLDIERECNCKDVCEGQSRKLYQISEPSS

Sequences:

>Translated_65_residues
MTFLLTLLGFVGVVTLMAIGVIFSRKPIKGSCGGLAQLDIERECNCKDVCEGQSRKLYQISEPSS
>Mature_64_residues
TFLLTLLGFVGVVTLMAIGVIFSRKPIKGSCGGLAQLDIERECNCKDVCEGQSRKLYQISEPSS

Specific function: Unknown

COG id: COG2991

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7052; Mature: 6921

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLLTLLGFVGVVTLMAIGVIFSRKPIKGSCGGLAQLDIERECNCKDVCEGQSRKLYQI
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCEEEC
SEPSS
CCCCC
>Mature Secondary Structure 
TFLLTLLGFVGVVTLMAIGVIFSRKPIKGSCGGLAQLDIERECNCKDVCEGQSRKLYQI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHCCCCCCCEEEC
SEPSS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA