Click here to switch to the map view.

The map label for this gene is ywrF [H]

Identifier: 218709692

GI number: 218709692

Start: 1828756

End: 1829367

Strand: Reverse

Name: ywrF [H]

Synonym: VS_1703

Alternate gene names: 218709692

Gene position: 1829367-1828756 (Counterclockwise)

Preceding gene: 218709696

Following gene: 218709691

Centisome position: 55.45

GC content: 46.41

Gene sequence:

>612_bases
ATGAACCTCAAACTTGATACTCTTGCTCCCACTCAGATTTATCACCTGATGACACAAACCGTTGTGCCTCGCCCGATAGC
GTGGGCATTAACGGAATCTTCCGACCAAGAGTACAACCTAGCGCCTTTCTCTTATTTCACGCCTGTTTCCAGCAATCCGC
CGCTACTGATGTTATCAGTTGGGAAAAAGCCGTCGGGCGAAATCAAAGATACCACTCGTAACGCCTTAGAAACGGGTAAG
CTAGTGATTCACATTGCTTCTTCAAGTTCTGCCGAAACAATGACAGCAACAGCAGCAACACTCGATTACGGTGATTCTGA
AGTAACCGCGAATAATATTGAGCTGGTTGAATTTGAGGGGTTTTCTTTACCGAGAGTGAAAGAGTGTGCGGTCGCTTTTG
GCTGCACCTTGTACGAAGTAAAAGAAGTGGGAGAGGCGCCTCAAAGCCTTATCTTTGCTCAAGTTGAAACCGTGTACATT
TCCGAAAATGTGATTGATAAAGAGAGTGAACGTCTGAAGATTGATGCGATGGCATTGGACCCTTTATCTCGACTTGGTGG
CGGTGAATACGCGACGCTTTCCAATGTGTTCTCTGTTGCACGCCCTAAATAG

Upstream 100 bases:

>100_bases
AAATTAAGAACACTCTCTACCGTTTCTGTTGATTAGGCATAGATACAGCATTGCTTAACACGTAAACTGAGTCGTAATTC
ACATAGACCAAGGACGTGCT

Downstream 100 bases:

>100_bases
TGTAACGATTTAGCTTAAGCAGAATCGCAGCCCTAGAAATCCATTACCTTAAATTTAAGTGTTCCTAAACTTATGTTAGA
TACCCAATACTCGCAGTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNLKLDTLAPTQIYHLMTQTVVPRPIAWALTESSDQEYNLAPFSYFTPVSSNPPLLMLSVGKKPSGEIKDTTRNALETGK
LVIHIASSSSAETMTATAATLDYGDSEVTANNIELVEFEGFSLPRVKECAVAFGCTLYEVKEVGEAPQSLIFAQVETVYI
SENVIDKESERLKIDAMALDPLSRLGGGEYATLSNVFSVARPK

Sequences:

>Translated_203_residues
MNLKLDTLAPTQIYHLMTQTVVPRPIAWALTESSDQEYNLAPFSYFTPVSSNPPLLMLSVGKKPSGEIKDTTRNALETGK
LVIHIASSSSAETMTATAATLDYGDSEVTANNIELVEFEGFSLPRVKECAVAFGCTLYEVKEVGEAPQSLIFAQVETVYI
SENVIDKESERLKIDAMALDPLSRLGGGEYATLSNVFSVARPK
>Mature_203_residues
MNLKLDTLAPTQIYHLMTQTVVPRPIAWALTESSDQEYNLAPFSYFTPVSSNPPLLMLSVGKKPSGEIKDTTRNALETGK
LVIHIASSSSAETMTATAATLDYGDSEVTANNIELVEFEGFSLPRVKECAVAFGCTLYEVKEVGEAPQSLIFAQVETVYI
SENVIDKESERLKIDAMALDPLSRLGGGEYATLSNVFSVARPK

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22084; Mature: 22084

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKLDTLAPTQIYHLMTQTVVPRPIAWALTESSDQEYNLAPFSYFTPVSSNPPLLMLSV
CCEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEC
GKKPSGEIKDTTRNALETGKLVIHIASSSSAETMTATAATLDYGDSEVTANNIELVEFEG
CCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEECCCCEEECCCEEEEEECC
FSLPRVKECAVAFGCTLYEVKEVGEAPQSLIFAQVETVYISENVIDKESERLKIDAMALD
CCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCCCCEEEEEEEEEC
PLSRLGGGEYATLSNVFSVARPK
HHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNLKLDTLAPTQIYHLMTQTVVPRPIAWALTESSDQEYNLAPFSYFTPVSSNPPLLMLSV
CCEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEEC
GKKPSGEIKDTTRNALETGKLVIHIASSSSAETMTATAATLDYGDSEVTANNIELVEFEG
CCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCEEEEEEEEEECCCCEEECCCEEEEEECC
FSLPRVKECAVAFGCTLYEVKEVGEAPQSLIFAQVETVYISENVIDKESERLKIDAMALD
CCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHEEEEEEEEECCCCCCCCCEEEEEEEEEC
PLSRLGGGEYATLSNVFSVARPK
HHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]