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The map label for this gene is 218709665

Identifier: 218709665

GI number: 218709665

Start: 1802889

End: 1803257

Strand: Reverse

Name: 218709665

Synonym: VS_1676

Alternate gene names: NA

Gene position: 1803257-1802889 (Counterclockwise)

Preceding gene: 218709668

Following gene: 218709664

Centisome position: 54.66

GC content: 45.53

Gene sequence:

>369_bases
ATGAAGTTAATACTCATTCGAGGGTTGCCCGGTTCCGGCAAGTCAACAAAAGCAAAAACCTACGATGCATTGCATGTCGA
AGCGGATATGTATTACGTGAATGAGCAAGGCGACTATAATTTTGACCCAAGGCAGTTGCAGCAAGCGCATGAGTGGTGTC
AGAACACTGCAGAAGACGGCTTGAAGCAAGGGTTAGACGTTGTAGTGTCGAATACCTTTATTAAGCAGTGGGAAATGAAG
GCTTACCGCCAACTCGCACTTAAATACGAAGCGGATTTGGTTATAGAAGTGTGCCGAGAGCAATATGGCAGCATTCACGA
CATCGAACCGTCAGTGATTAAGCGTATGGCAAAAGATTGGCAAGAATAG

Upstream 100 bases:

>100_bases
AAGGACTCGGTTTTCGGATGTTGAGCAACGGCAGTTATCAGAGAAACTCGTCACTATTTAAGATAAACTCATGTTTTAAA
ATTAGCCTGTAAAGTGACAG

Downstream 100 bases:

>100_bases
CCTCGTTCTTCCTCTGCTTACGTGGCTGAATGGTAGCTAGAATTAAATTAATAGAACAACTCCAAGGTAACGATTGAAAT
GGCAAAGCGCTCTGTTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKLILIRGLPGSGKSTKAKTYDALHVEADMYYVNEQGDYNFDPRQLQQAHEWCQNTAEDGLKQGLDVVVSNTFIKQWEMK
AYRQLALKYEADLVIEVCREQYGSIHDIEPSVIKRMAKDWQE

Sequences:

>Translated_122_residues
MKLILIRGLPGSGKSTKAKTYDALHVEADMYYVNEQGDYNFDPRQLQQAHEWCQNTAEDGLKQGLDVVVSNTFIKQWEMK
AYRQLALKYEADLVIEVCREQYGSIHDIEPSVIKRMAKDWQE
>Mature_122_residues
MKLILIRGLPGSGKSTKAKTYDALHVEADMYYVNEQGDYNFDPRQLQQAHEWCQNTAEDGLKQGLDVVVSNTFIKQWEMK
AYRQLALKYEADLVIEVCREQYGSIHDIEPSVIKRMAKDWQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI119226224, Length=137, Percent_Identity=32.1167883211679, Blast_Score=75, Evalue=9e-15,
Organism=Homo sapiens, GI119226227, Length=94, Percent_Identity=38.2978723404255, Blast_Score=73, Evalue=5e-14,
Organism=Homo sapiens, GI7656971, Length=91, Percent_Identity=40.6593406593407, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14170; Mature: 14170

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLILIRGLPGSGKSTKAKTYDALHVEADMYYVNEQGDYNFDPRQLQQAHEWCQNTAEDG
CEEEEEECCCCCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LKQGLDVVVSNTFIKQWEMKAYRQLALKYEADLVIEVCREQYGSIHDIEPSVIKRMAKDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
QE
CC
>Mature Secondary Structure
MKLILIRGLPGSGKSTKAKTYDALHVEADMYYVNEQGDYNFDPRQLQQAHEWCQNTAEDG
CEEEEEECCCCCCCCCCCCCHHEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LKQGLDVVVSNTFIKQWEMKAYRQLALKYEADLVIEVCREQYGSIHDIEPSVIKRMAKDW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
QE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA