| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709654
Identifier: 218709654
GI number: 218709654
Start: 1793502
End: 1793744
Strand: Reverse
Name: 218709654
Synonym: VS_1664
Alternate gene names: NA
Gene position: 1793744-1793502 (Counterclockwise)
Preceding gene: 218709655
Following gene: 218709652
Centisome position: 54.37
GC content: 36.21
Gene sequence:
>243_bases ATGAAGGTAAGATATCGAATGAGATATATATTGGGAAAGGGTTATGCTATCACTGCTATGCTATCTTCCTGTAATATTTC AGCGTCATATGTTGTTGATGACACCTATTACGACCTAAGTATCATTAGCTTCAAATCTCATGATAGTCAAACTCTTCGAA GCGGGCGTTTGCTTGATTTGGATTGTGATAATCGAATGATAAAGGAGCATATCTATTCTATTTGGGCGAAGGATAATACA TGA
Upstream 100 bases:
>100_bases TTTTAATGGTGATGGAAGAATCAAATTTGATGAAAAACTTCATTGCTTCGTTGGATGCGCAAATACAGGCTGATTTAAGG CGTAAAGTAAGAGGTGGTAA
Downstream 100 bases:
>100_bases GCGCTTGGGACATAATTTCAGAGTAACTTCAAATGCTGGAATTTCGAGTTTATTACCTAAAATTGATTGAGCTGTCACGC TGACATCATCTGTTTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MKVRYRMRYILGKGYAITAMLSSCNISASYVVDDTYYDLSIISFKSHDSQTLRSGRLLDLDCDNRMIKEHIYSIWAKDNT
Sequences:
>Translated_80_residues MKVRYRMRYILGKGYAITAMLSSCNISASYVVDDTYYDLSIISFKSHDSQTLRSGRLLDLDCDNRMIKEHIYSIWAKDNT >Mature_80_residues MKVRYRMRYILGKGYAITAMLSSCNISASYVVDDTYYDLSIISFKSHDSQTLRSGRLLDLDCDNRMIKEHIYSIWAKDNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9323; Mature: 9323
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRYRMRYILGKGYAITAMLSSCNISASYVVDDTYYDLSIISFKSHDSQTLRSGRLLDL CCEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCHHCCCCEEEE DCDNRMIKEHIYSIWAKDNT CCCCHHHHHHHHHHEECCCC >Mature Secondary Structure MKVRYRMRYILGKGYAITAMLSSCNISASYVVDDTYYDLSIISFKSHDSQTLRSGRLLDL CCEEEEEEEECCCCEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCHHCCCCEEEE DCDNRMIKEHIYSIWAKDNT CCCCHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA