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The map label for this gene is glpQ [H]

Identifier: 218709601

GI number: 218709601

Start: 1727096

End: 1728151

Strand: Reverse

Name: glpQ [H]

Synonym: VS_1611

Alternate gene names: 218709601

Gene position: 1728151-1727096 (Counterclockwise)

Preceding gene: 218709602

Following gene: 218709600

Centisome position: 52.38

GC content: 46.12

Gene sequence:

>1056_bases
ATGAAAACAACGTCACTGTCTCTGACCTTATTAGCACTAAGTTTATCTGCAAATGCGTTCGCTGATCCTTTAGTGATTGC
GCATCGCGGCGCTTCTGGTTATTTACCTGAACACACATTACCCGCTAAAGCGCTCGCTTATGCGATGAAACCCGACTACA
TCGAACAAGATGTCGTGATGACCAAAGACGACCAATTGGTGGTTTTGCATGATCATTATCTAGACCGAGTTACCGATGTC
GCGGATCGCTTTCCAGACCGTGCTCGTTCAGATGGCCGTTTCTATGCGATTGATTTTACGCTCGCTGAGATCAAATCCCT
AAAAGTGACCGAAGGCTTTAACCTAGATGAACAAGGTAACAGAGTAGCAGGGTACCCAACGCGCTTCCCAATGTGGCAGT
CTGATTTCCGTGTCGCTACCTTTGCTGAAGAAATCGAGCTGATCCAAGGCTTGAATAAGACCCTTGGTTATAACGTGGGT
ATCTACCCAGAAATCAAAGCACCTTGGTTCCATCGTCACGAAGGCAAAGACATCTCCAAAGCTGTACTTGCGACCTTGCA
TCAATATGGTTACCTATCAAAAGACGACAAAGTGTATTTGCAGTGTTTTGACGCCAATGAACTTCAACGCATCAATGATG
AACTCATGCCTGCGATGGAAATGGATCTTAAGCTCGTTCAGTTGATGGCTTATACAGATTGGAATGAAACCATGACGTAC
CAAGGCGACAAAGCAACGCCGTACAGTTACGACTGGATGTTTGAAGCAGGTGGCATGGAAAAAGTGGCGACTTATGCGGA
AGGAATAGGCCCTTGGAAGCCAATGTTGGTGGACGATGCATCAACCAAAGATAACATCATTATTAAACCGTTAATGAAGT
CAGCAAAAGACGCGGGCTTAGACGTTCACCCGTACACGTTCCGTGCCGACCCGGGAAGAATCCCAGCTTATGCTGATAAC
TTTGATGGCATGTTGGATGTCTTCTACAACCAAGTCAAAGTCGATGGTGTGTTTACTGACTTCCCAGACAAAGCGGTCGA
CTTCTTGAACCGTTAA

Upstream 100 bases:

>100_bases
GAAAGAAGCGCTAGCTCAGTAGTGTATTTACTGAATCACATCTATAAATAACAACAGAGGCAGGTATATCCTGCTTCTGT
TTTATCAAGGGGAAACAATA

Downstream 100 bases:

>100_bases
TATCCTGCCAATTACAAGCGACTATTAACGAGATATTCAGAGCCAAAAGCACACACTAAAGCTGTTTTTGGTTCTTCTTT
CACTTTTTTGTATTGGCCTC

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKTTSLSLTLLALSLSANAFADPLVIAHRGASGYLPEHTLPAKALAYAMKPDYIEQDVVMTKDDQLVVLHDHYLDRVTDV
ADRFPDRARSDGRFYAIDFTLAEIKSLKVTEGFNLDEQGNRVAGYPTRFPMWQSDFRVATFAEEIELIQGLNKTLGYNVG
IYPEIKAPWFHRHEGKDISKAVLATLHQYGYLSKDDKVYLQCFDANELQRINDELMPAMEMDLKLVQLMAYTDWNETMTY
QGDKATPYSYDWMFEAGGMEKVATYAEGIGPWKPMLVDDASTKDNIIIKPLMKSAKDAGLDVHPYTFRADPGRIPAYADN
FDGMLDVFYNQVKVDGVFTDFPDKAVDFLNR

Sequences:

>Translated_351_residues
MKTTSLSLTLLALSLSANAFADPLVIAHRGASGYLPEHTLPAKALAYAMKPDYIEQDVVMTKDDQLVVLHDHYLDRVTDV
ADRFPDRARSDGRFYAIDFTLAEIKSLKVTEGFNLDEQGNRVAGYPTRFPMWQSDFRVATFAEEIELIQGLNKTLGYNVG
IYPEIKAPWFHRHEGKDISKAVLATLHQYGYLSKDDKVYLQCFDANELQRINDELMPAMEMDLKLVQLMAYTDWNETMTY
QGDKATPYSYDWMFEAGGMEKVATYAEGIGPWKPMLVDDASTKDNIIIKPLMKSAKDAGLDVHPYTFRADPGRIPAYADN
FDGMLDVFYNQVKVDGVFTDFPDKAVDFLNR
>Mature_351_residues
MKTTSLSLTLLALSLSANAFADPLVIAHRGASGYLPEHTLPAKALAYAMKPDYIEQDVVMTKDDQLVVLHDHYLDRVTDV
ADRFPDRARSDGRFYAIDFTLAEIKSLKVTEGFNLDEQGNRVAGYPTRFPMWQSDFRVATFAEEIELIQGLNKTLGYNVG
IYPEIKAPWFHRHEGKDISKAVLATLHQYGYLSKDDKVYLQCFDANELQRINDELMPAMEMDLKLVQLMAYTDWNETMTY
QGDKATPYSYDWMFEAGGMEKVATYAEGIGPWKPMLVDDASTKDNIIIKPLMKSAKDAGLDVHPYTFRADPGRIPAYADN
FDGMLDVFYNQVKVDGVFTDFPDKAVDFLNR

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=356, Percent_Identity=60.3932584269663, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 39785; Mature: 39785

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTSLSLTLLALSLSANAFADPLVIAHRGASGYLPEHTLPAKALAYAMKPDYIEQDVVM
CCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEE
TKDDQLVVLHDHYLDRVTDVADRFPDRARSDGRFYAIDFTLAEIKSLKVTEGFNLDEQGN
ECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHEEEEECCCCCCCCCC
RVAGYPTRFPMWQSDFRVATFAEEIELIQGLNKTLGYNVGIYPEIKAPWFHRHEGKDISK
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
AVLATLHQYGYLSKDDKVYLQCFDANELQRINDELMPAMEMDLKLVQLMAYTDWNETMTY
HHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
QGDKATPYSYDWMFEAGGMEKVATYAEGIGPWKPMLVDDASTKDNIIIKPLMKSAKDAGL
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCEEEHHHHHHHHHCCC
DVHPYTFRADPGRIPAYADNFDGMLDVFYNQVKVDGVFTDFPDKAVDFLNR
CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHEEECEEEECCCHHHHHHHCC
>Mature Secondary Structure
MKTTSLSLTLLALSLSANAFADPLVIAHRGASGYLPEHTLPAKALAYAMKPDYIEQDVVM
CCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEE
TKDDQLVVLHDHYLDRVTDVADRFPDRARSDGRFYAIDFTLAEIKSLKVTEGFNLDEQGN
ECCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHEEEEECCCCCCCCCC
RVAGYPTRFPMWQSDFRVATFAEEIELIQGLNKTLGYNVGIYPEIKAPWFHRHEGKDISK
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
AVLATLHQYGYLSKDDKVYLQCFDANELQRINDELMPAMEMDLKLVQLMAYTDWNETMTY
HHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
QGDKATPYSYDWMFEAGGMEKVATYAEGIGPWKPMLVDDASTKDNIIIKPLMKSAKDAGL
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCEEEHHHHHHHHHCCC
DVHPYTFRADPGRIPAYADNFDGMLDVFYNQVKVDGVFTDFPDKAVDFLNR
CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHEEECEEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]