| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709573
Identifier: 218709573
GI number: 218709573
Start: 1710834
End: 1711415
Strand: Reverse
Name: 218709573
Synonym: VS_1583
Alternate gene names: NA
Gene position: 1711415-1710834 (Counterclockwise)
Preceding gene: 218709574
Following gene: 218709572
Centisome position: 51.87
GC content: 44.16
Gene sequence:
>582_bases GTGGAAGAAATCAAAGGCATTCTGCAATTCATGGTCGAAATTGAACAATTAAAGGACGTTCATCGACAAACAAAACCGGT TGGATTGGATCGCTATGAAAACTCCGCCGAACACAGCTGGCACGTCTGCTTGAGCGCACTTATGTTGAAAGATTACGCCA ATGAAGAAATCGATATTACGCGAGTGATGAAGATGCTGTTGATTCATGACCTTGGGGAAATCGATGCCGGAGACACCATC ATTTATGCCAGTGAAACCGAAGAAAACAAACTCAAAGAGAGAAACTGTGTTGAGCGCTTGCTGAAATCATTGCCAAGCCA TTTAAGAACCGAGTATTTGGATTTATGGCTTGAGTTCGAAGCGGGTGAGTCACCGGAAGCCAGATTTGGTAAGGCGATCG ATAGAGTGCCACCTTTGCTTCATAACATCCATGGTGATGGTCACAGCTGGAAGAAGCACAACATATCCAAAGACAAAGTA CTGACCTTTAATGGCGAGCGTATCTCTAAAGGCAGTCGTGCTCTATGGAAAGAACTAGAAGTGCAACTTGAAGGTGCTGC GGACAAAGGGTTGTTAAAATAA
Upstream 100 bases:
>100_bases GGGATCTGCTTCAGTTAAACCCTGAACACCCTATGGCTAACAGGTAAATAAGCTAAGGCTCATTCGTGTGTTGCTCAAGC TCAATTAAAGGAAGCTCATC
Downstream 100 bases:
>100_bases AGTATTGAAAGGCCATGAGTTTTACGAGGTTCAAATGAAATACTTAGAAGTTGATTCTAGCGAAATCCCAATGGTGTTGT TACTTGAAGCTGATCCGTCA
Product: putative hydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD Domain Protein; HD Domain-Containing Protein; HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase HD Subdomain; Hydrolase; Xin-Antitoxin System Toxin Component PIN Family; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Hydrolase-Like Protein; HAD Superfamily Hydrolase; Hydrolases Of HD Superfamily; Hydrolase Of HD Superfamily; Metal-Dependent Phosphoesterase; HD Superfamily Metal-Dependent Phosphohydrolase; HD Domain-Containing; HDDC2 Protein
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MEEIKGILQFMVEIEQLKDVHRQTKPVGLDRYENSAEHSWHVCLSALMLKDYANEEIDITRVMKMLLIHDLGEIDAGDTI IYASETEENKLKERNCVERLLKSLPSHLRTEYLDLWLEFEAGESPEARFGKAIDRVPPLLHNIHGDGHSWKKHNISKDKV LTFNGERISKGSRALWKELEVQLEGAADKGLLK
Sequences:
>Translated_193_residues MEEIKGILQFMVEIEQLKDVHRQTKPVGLDRYENSAEHSWHVCLSALMLKDYANEEIDITRVMKMLLIHDLGEIDAGDTI IYASETEENKLKERNCVERLLKSLPSHLRTEYLDLWLEFEAGESPEARFGKAIDRVPPLLHNIHGDGHSWKKHNISKDKV LTFNGERISKGSRALWKELEVQLEGAADKGLLK >Mature_193_residues MEEIKGILQFMVEIEQLKDVHRQTKPVGLDRYENSAEHSWHVCLSALMLKDYANEEIDITRVMKMLLIHDLGEIDAGDTI IYASETEENKLKERNCVERLLKSLPSHLRTEYLDLWLEFEAGESPEARFGKAIDRVPPLLHNIHGDGHSWKKHNISKDKV LTFNGERISKGSRALWKELEVQLEGAADKGLLK
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22213; Mature: 22213
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIKGILQFMVEIEQLKDVHRQTKPVGLDRYENSAEHSWHVCLSALMLKDYANEEIDIT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH RVMKMLLIHDLGEIDAGDTIIYASETEENKLKERNCVERLLKSLPSHLRTEYLDLWLEFE HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC AGESPEARFGKAIDRVPPLLHNIHGDGHSWKKHNISKDKVLTFNGERISKGSRALWKELE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEECCCHHCCHHHHHHHHHH VQLEGAADKGLLK HHHCCCCCCCCCC >Mature Secondary Structure MEEIKGILQFMVEIEQLKDVHRQTKPVGLDRYENSAEHSWHVCLSALMLKDYANEEIDIT CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHH RVMKMLLIHDLGEIDAGDTIIYASETEENKLKERNCVERLLKSLPSHLRTEYLDLWLEFE HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC AGESPEARFGKAIDRVPPLLHNIHGDGHSWKKHNISKDKVLTFNGERISKGSRALWKELE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEECCCHHCCHHHHHHHHHH VQLEGAADKGLLK HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA