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The map label for this gene is 218709563

Identifier: 218709563

GI number: 218709563

Start: 1705299

End: 1705568

Strand: Reverse

Name: 218709563

Synonym: VS_1573

Alternate gene names: NA

Gene position: 1705568-1705299 (Counterclockwise)

Preceding gene: 218709565

Following gene: 218709562

Centisome position: 51.69

GC content: 40.0

Gene sequence:

>270_bases
ATGAATTGGAGGGGTATTATGATTAGTTGCAACGATTACGATTATATTGAGATTGTGTGTATGCACCGATACCCAATCAA
ATTAACGCTGAAGTCTGGCGAGCAGATTGAATGTGTCGGATTAGATACTCAACGCAATGATAGCCGTGAAGAGTGCATTA
AGGTCAGTATTCAAGGTGTAGAACAACTTGTCGTACTCACTGATCTTTCCACACTAGAAGTCTGTGTCGACAATCCTCAT
TTTCAGCAGATTTCATTCAAAACGTCATAG

Upstream 100 bases:

>100_bases
TTAGAAGCAAGTTTAGTTTCGGACGAACATCAATGTGACTTGGGTAAATGATTGATTATATGCATATTGCATAGTATGGC
GTGTCGCATTAGCGTGGTGG

Downstream 100 bases:

>100_bases
GCTTTCAAATGAATAACACCATAGAACAATGCTATTGCACCGCATGCAGAGAAGACACACAACATGTTGTTGTGTTGGTC
AGAAAGACGAGTGCGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Modulator Of Rho-Dependent Transcription Termination

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MNWRGIMISCNDYDYIEIVCMHRYPIKLTLKSGEQIECVGLDTQRNDSREECIKVSIQGVEQLVVLTDLSTLEVCVDNPH
FQQISFKTS

Sequences:

>Translated_89_residues
MNWRGIMISCNDYDYIEIVCMHRYPIKLTLKSGEQIECVGLDTQRNDSREECIKVSIQGVEQLVVLTDLSTLEVCVDNPH
FQQISFKTS
>Mature_89_residues
MNWRGIMISCNDYDYIEIVCMHRYPIKLTLKSGEQIECVGLDTQRNDSREECIKVSIQGVEQLVVLTDLSTLEVCVDNPH
FQQISFKTS

Specific function: Unknown

COG id: COG4568

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10270; Mature: 10270

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWRGIMISCNDYDYIEIVCMHRYPIKLTLKSGEQIECVGLDTQRNDSREECIKVSIQGV
CCCCEEEEEECCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCHHHEEEEEECCC
EQLVVLTDLSTLEVCVDNPHFQQISFKTS
EEEEEEECCCEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MNWRGIMISCNDYDYIEIVCMHRYPIKLTLKSGEQIECVGLDTQRNDSREECIKVSIQGV
CCCCEEEEEECCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCHHHEEEEEECCC
EQLVVLTDLSTLEVCVDNPHFQQISFKTS
EEEEEEECCCEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA