| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709540
Identifier: 218709540
GI number: 218709540
Start: 1685937
End: 1686056
Strand: Direct
Name: 218709540
Synonym: VS_1549
Alternate gene names: NA
Gene position: 1685937-1686056 (Clockwise)
Preceding gene: 218709532
Following gene: 218709544
Centisome position: 51.1
GC content: 37.5
Gene sequence:
>120_bases ATGTCTGATGATTCTTACTTCAGCGGTATCACTCTAACTAAAAAACACTTTAGCCTTCATGCCGCAGACCAACATGGTAA GGCAATACTTAGAAGTCAGTTACTCGATCTTAATTACTAA
Upstream 100 bases:
>100_bases CTCCTTGATGATGAAAAGTCGACAATGCGCCATAGCGACTAATATGGACTCCCCCTCCTGAGGAACTGCCACACTTAAGT GGGATTACACCGGAGGTAAC
Downstream 100 bases:
>100_bases TCCCATCCTCGTTTTTTATACGGGGCAATTCCTCATATGTACTGATTGCTTTAACTGCACCGCTTAGATCATTTTTACCA TTAAAGCTATGCTTAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MSDDSYFSGITLTKKHFSLHAADQHGKAILRSQLLDLNY
Sequences:
>Translated_39_residues MSDDSYFSGITLTKKHFSLHAADQHGKAILRSQLLDLNY >Mature_38_residues SDDSYFSGITLTKKHFSLHAADQHGKAILRSQLLDLNY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4423; Mature: 4292
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDSYFSGITLTKKHFSLHAADQHGKAILRSQLLDLNY CCCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCCC >Mature Secondary Structure SDDSYFSGITLTKKHFSLHAADQHGKAILRSQLLDLNY CCCCCCCCEEEECCCEEEECCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA