| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709534
Identifier: 218709534
GI number: 218709534
Start: 1682784
End: 1683032
Strand: Reverse
Name: 218709534
Synonym: VS_1543
Alternate gene names: NA
Gene position: 1683032-1682784 (Counterclockwise)
Preceding gene: 218709535
Following gene: 218709533
Centisome position: 51.01
GC content: 42.57
Gene sequence:
>249_bases ATGCAAGAAAATGGCACTGTATTACGATGTGGAAACTGCAATAAGGAAACGTCTCACATCAGGTTAAGCGCGTCCGAAGT GAAGTTAAAACAGCAAGAGAAGAACAGCTTAAAGTCGCGAATTCTAAATATTGCATTCGGTGTGTTGTTGGGTTCACATA AATCAGAATCTAAAATTAGCTACTTCAAGTGCTCGGTTTGTCGTACTGAGTACGATGATAGCGAAAGCGCTCCCCATGGT TGGGGCTAG
Upstream 100 bases:
>100_bases TCTAAGCGTTTATTTATTAATGTCGGTTTGGAACCTAATTCAGTCAGCGAACTTAGGTTATAACGAAACTGTCTATATAC GTACTTAAAGGAATAGGGAA
Downstream 100 bases:
>100_bases TTGGCCTTGTTACTATGAACTCACTTCTCAACGTTTATCGTGAAGATTTGCAGATTATTGGTATGATGTTTCTATAGTCT TCGAGAGGTTTTATGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MQENGTVLRCGNCNKETSHIRLSASEVKLKQQEKNSLKSRILNIAFGVLLGSHKSESKISYFKCSVCRTEYDDSESAPHG WG
Sequences:
>Translated_82_residues MQENGTVLRCGNCNKETSHIRLSASEVKLKQQEKNSLKSRILNIAFGVLLGSHKSESKISYFKCSVCRTEYDDSESAPHG WG >Mature_82_residues MQENGTVLRCGNCNKETSHIRLSASEVKLKQQEKNSLKSRILNIAFGVLLGSHKSESKISYFKCSVCRTEYDDSESAPHG WG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9161; Mature: 9161
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQENGTVLRCGNCNKETSHIRLSASEVKLKQQEKNSLKSRILNIAFGVLLGSHKSESKIS CCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE YFKCSVCRTEYDDSESAPHGWG EEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MQENGTVLRCGNCNKETSHIRLSASEVKLKQQEKNSLKSRILNIAFGVLLGSHKSESKIS CCCCCCEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE YFKCSVCRTEYDDSESAPHGWG EEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA