Click here to switch to the map view.

The map label for this gene is 218709457

Identifier: 218709457

GI number: 218709457

Start: 1598948

End: 1599622

Strand: Direct

Name: 218709457

Synonym: VS_1466

Alternate gene names: NA

Gene position: 1598948-1599622 (Clockwise)

Preceding gene: 218709456

Following gene: 218709458

Centisome position: 48.46

GC content: 46.07

Gene sequence:

>675_bases
ATGACGCCTGATTGGATCGGAGCCTTTGTTGTTGGGTTGATCGGCGCAGGTCACTGCATGGGAATGTGTGGTGGCATTGC
GTCGCTTCTTTCAATTGGCAACAGTAAACCTTCCCCTGTCATTCCCCTGCTATATAACCTAGGACGCTTGCTAAGCTATG
CCGTGATTGGCGGTGTGGTTGGCGGTGCAATTTCTTCTATAGGTCAGCTAAGCGATTTTAACGCTCTGCTTGGTTGGCTG
CGATTATTTGCTGCTGGCTTTATGATCGTCTTAGGTTTGTATATTGGCAAATGGTGGTTCGGCTTGTTGTTTTTTGAAAA
AGTCGGACAAAAACTATGGCGCTATATCTCTCCTGTCGGTAAATCATTTCTACCATTGAAGCATCCTAGTCACGCTCTTC
CATTTGGTTTCATTTGGGGGTGGTTACCATGTGGCCTTGTTTATTCTATGCTTACATGGGCGGCCGTATCAGGAAGTTGG
TATAACGGAGCGGGTATCATGCTTGCTTTCGGTTTAGGAACCCTCCCTGCGATGCTCACGGTTGGAATGGGTGCCAATTT
CCTCAAAAAACTGCAACAAGCTGACTTATTTCGTCAGTTTGGTGCAGTTTTAATCCTCATTTACGGCTTCTATACCGGTT
ATATGGCGCTACAGCTCATTATTTATACCGTATAG

Upstream 100 bases:

>100_bases
TTTGATGAAGACACTAATGCTCATCATCATTCTGATAGTAAACCTGTTAAGAACGAGAAAGCTAACGGAGAAAGCCAAAC
TAACTTAGACAAAAAGAACG

Downstream 100 bases:

>100_bases
CGGCGTCTTTAATCCGGTTTTTTTACTACCCTTTAGGATTAAGGAATGCTAAAATATTGACGTATATCAAATAGTGAAAG
ATTGTTATGATTTCTGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTPDWIGAFVVGLIGAGHCMGMCGGIASLLSIGNSKPSPVIPLLYNLGRLLSYAVIGGVVGGAISSIGQLSDFNALLGWL
RLFAAGFMIVLGLYIGKWWFGLLFFEKVGQKLWRYISPVGKSFLPLKHPSHALPFGFIWGWLPCGLVYSMLTWAAVSGSW
YNGAGIMLAFGLGTLPAMLTVGMGANFLKKLQQADLFRQFGAVLILIYGFYTGYMALQLIIYTV

Sequences:

>Translated_224_residues
MTPDWIGAFVVGLIGAGHCMGMCGGIASLLSIGNSKPSPVIPLLYNLGRLLSYAVIGGVVGGAISSIGQLSDFNALLGWL
RLFAAGFMIVLGLYIGKWWFGLLFFEKVGQKLWRYISPVGKSFLPLKHPSHALPFGFIWGWLPCGLVYSMLTWAAVSGSW
YNGAGIMLAFGLGTLPAMLTVGMGANFLKKLQQADLFRQFGAVLILIYGFYTGYMALQLIIYTV
>Mature_223_residues
TPDWIGAFVVGLIGAGHCMGMCGGIASLLSIGNSKPSPVIPLLYNLGRLLSYAVIGGVVGGAISSIGQLSDFNALLGWLR
LFAAGFMIVLGLYIGKWWFGLLFFEKVGQKLWRYISPVGKSFLPLKHPSHALPFGFIWGWLPCGLVYSMLTWAAVSGSWY
NGAGIMLAFGLGTLPAMLTVGMGANFLKKLQQADLFRQFGAVLILIYGFYTGYMALQLIIYTV

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24187; Mature: 24056

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDWIGAFVVGLIGAGHCMGMCGGIASLLSIGNSKPSPVIPLLYNLGRLLSYAVIGGVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GGAISSIGQLSDFNALLGWLRLFAAGFMIVLGLYIGKWWFGLLFFEKVGQKLWRYISPVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFLPLKHPSHALPFGFIWGWLPCGLVYSMLTWAAVSGSWYNGAGIMLAFGLGTLPAMLT
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VGMGANFLKKLQQADLFRQFGAVLILIYGFYTGYMALQLIIYTV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPDWIGAFVVGLIGAGHCMGMCGGIASLLSIGNSKPSPVIPLLYNLGRLLSYAVIGGVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GGAISSIGQLSDFNALLGWLRLFAAGFMIVLGLYIGKWWFGLLFFEKVGQKLWRYISPVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSFLPLKHPSHALPFGFIWGWLPCGLVYSMLTWAAVSGSWYNGAGIMLAFGLGTLPAMLT
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VGMGANFLKKLQQADLFRQFGAVLILIYGFYTGYMALQLIIYTV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA