Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709418

Identifier: 218709418

GI number: 218709418

Start: 1569136

End: 1570845

Strand: Direct

Name: 218709418

Synonym: VS_1427

Alternate gene names: NA

Gene position: 1569136-1570845 (Clockwise)

Preceding gene: 218709417

Following gene: 218709419

Centisome position: 47.56

GC content: 43.45

Gene sequence:

>1710_bases
ATGACTTGTAATAAATTTAAATTAACAACAGTTGCAGCCTTAGTTTTGGCTGCAACTAACGCGAATGCTGCACTGTACAA
GGTAGTTGAAGTCGCGACTCCTAGCTCAATTGTCGGAGCTTCTGAAACGTTTGGTGTCGCGATTCAACCAGCGGCGGTTA
CCGGAACTGAAAGTTGTTTTACCAACGCTACTATCGGTGGTGTCGCATGTGATAGCTTTAAGCTAGCAGGTGAAACTCGT
AATTCGCTTGAAGCCATTAGTTATCGTGAAGAAGTTCCTTTTGCTATGGATGCTGTCTTCCAATATTTACAAGAGTTCGA
TGACTTCAAAAACTATTGTAACCGTGAACTAAGATATTCCACATGTGAAAGCTGGGCGAAAACTCGCTGGGAAGATACTT
GGTTTAAGGAAAGAAACAACCTGAGTTATGTAAATGCAAAGGCATTTATAGAAGGCGGGGCAATACTCGATACTCGCAAT
ACAGTGATCAACTCTCTAGATAAAGATGCCAACCCACTCGGTGTTAAGTCTGAGGGAACCATCCGAAACAATGCAATATT
TACAACAACAGCCAAGCCTGCAGGATCTTCTGAGACTCGAGCATGGAAAGCCATCACAGCGAGTAATGGTACTGTTTACA
ATGTAGGTAGTGTTTCTACTAGTGAAACCATTACGGAGACGTCAACGCCGGATCCTGTATTTAGTTCAAAAGCTGCTATT
TGGGATGGTACGAATACCAAGCAAATCGATTGGACTCGTGGTGGAACTGCTAGACAAGGCGATTACTATGCTCAAGGTAG
CATGCGTTCAATTGCCGAATCGGATACTAAGTTTTATGGCGTAGGCTACAATACTGTTGATGGTAGTGGTGATCTGCAAG
ATATGAATGCATCTGTATTCATCAGTAAATCTCTGGACTTAGCTGACAGCGCGAATACTTGGACGACCAAATCAATTGAG
GGGGCCAAGGTCAACTCTAACTCGTCTAATGATTACAAATACAGTAACTCTGTAGCGACCGATATCAACAAAAACTTGTT
TGTTATTGGTAACTCTAAGCGTAATGGTCGAGTGCCTGAAAATGGTAGCGCAGGCAGTAAGATGTTCGTTGTTACTGATG
CTTCAGTTGCGACTCCAACAGCGACATACCTAACGGGTGGTATCTTTTTTGCTGGTTCGAGTGGTGAAGCTAGAGCAGTT
AACAACTTCAATGAAATTGTTGGTCAAGTTGACGCAGAAACAACGCGTGAAGTTGATGGAAGTGAGCGTAGACACCGCGG
CTTTATTTATCCATATCAAGCAACGGGTACTGACCCATCAAGAATTGATCTGTTTCAGAACAAAGCTTGGTGGCTAGACG
ATCTAACTAACGATGGCAACGTTTCTGGAGAGAACAACAAGTTCCGAATCATTGATGCTTCAGGTATCAACGATGCGGGT
GTTATCTCTGCGACGGCTATCAAATGTGTTGTTGGCGGCACACCTAAACCATACGATACAACGTCTCACAACTCATACTG
TGGCGGTGCTGCGTCTAATGCGGTTGAAAAGGTTGTTGCGGTTAAATTGATTCCTATCGAAGGTAAAGGTAAGAGCGATA
TCCAAGCTCGTAGTACTGATACAGCAAAGGTCGATCGTAAAGGCGGTAGCTTAGGTTGGTTCGCTTTGACTGTACTCGGC
TTATTAGGGTTCCGTAGAAAATTTAAATAA

Upstream 100 bases:

>100_bases
AGTATTAGATAAGCTATCTGCAGCAGAGCAGGAGCTTGAAGTTGCTTTTGAGCGCTGGGAAGAGCTCGAGGCACTACAAC
AGGAAAGTTAAGAAGTAATC

Downstream 100 bases:

>100_bases
TTTCATCTCTTGAGCCCGAGTTCACAATTCTGAATTCGGGCTTTTTTTTCGCCTTGAGAAAAGTGAAAAACTGGTCGATT
CTTAAAGTTGGAGTCACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MTCNKFKLTTVAALVLAATNANAALYKVVEVATPSSIVGASETFGVAIQPAAVTGTESCFTNATIGGVACDSFKLAGETR
NSLEAISYREEVPFAMDAVFQYLQEFDDFKNYCNRELRYSTCESWAKTRWEDTWFKERNNLSYVNAKAFIEGGAILDTRN
TVINSLDKDANPLGVKSEGTIRNNAIFTTTAKPAGSSETRAWKAITASNGTVYNVGSVSTSETITETSTPDPVFSSKAAI
WDGTNTKQIDWTRGGTARQGDYYAQGSMRSIAESDTKFYGVGYNTVDGSGDLQDMNASVFISKSLDLADSANTWTTKSIE
GAKVNSNSSNDYKYSNSVATDINKNLFVIGNSKRNGRVPENGSAGSKMFVVTDASVATPTATYLTGGIFFAGSSGEARAV
NNFNEIVGQVDAETTREVDGSERRHRGFIYPYQATGTDPSRIDLFQNKAWWLDDLTNDGNVSGENNKFRIIDASGINDAG
VISATAIKCVVGGTPKPYDTTSHNSYCGGAASNAVEKVVAVKLIPIEGKGKSDIQARSTDTAKVDRKGGSLGWFALTVLG
LLGFRRKFK

Sequences:

>Translated_569_residues
MTCNKFKLTTVAALVLAATNANAALYKVVEVATPSSIVGASETFGVAIQPAAVTGTESCFTNATIGGVACDSFKLAGETR
NSLEAISYREEVPFAMDAVFQYLQEFDDFKNYCNRELRYSTCESWAKTRWEDTWFKERNNLSYVNAKAFIEGGAILDTRN
TVINSLDKDANPLGVKSEGTIRNNAIFTTTAKPAGSSETRAWKAITASNGTVYNVGSVSTSETITETSTPDPVFSSKAAI
WDGTNTKQIDWTRGGTARQGDYYAQGSMRSIAESDTKFYGVGYNTVDGSGDLQDMNASVFISKSLDLADSANTWTTKSIE
GAKVNSNSSNDYKYSNSVATDINKNLFVIGNSKRNGRVPENGSAGSKMFVVTDASVATPTATYLTGGIFFAGSSGEARAV
NNFNEIVGQVDAETTREVDGSERRHRGFIYPYQATGTDPSRIDLFQNKAWWLDDLTNDGNVSGENNKFRIIDASGINDAG
VISATAIKCVVGGTPKPYDTTSHNSYCGGAASNAVEKVVAVKLIPIEGKGKSDIQARSTDTAKVDRKGGSLGWFALTVLG
LLGFRRKFK
>Mature_568_residues
TCNKFKLTTVAALVLAATNANAALYKVVEVATPSSIVGASETFGVAIQPAAVTGTESCFTNATIGGVACDSFKLAGETRN
SLEAISYREEVPFAMDAVFQYLQEFDDFKNYCNRELRYSTCESWAKTRWEDTWFKERNNLSYVNAKAFIEGGAILDTRNT
VINSLDKDANPLGVKSEGTIRNNAIFTTTAKPAGSSETRAWKAITASNGTVYNVGSVSTSETITETSTPDPVFSSKAAIW
DGTNTKQIDWTRGGTARQGDYYAQGSMRSIAESDTKFYGVGYNTVDGSGDLQDMNASVFISKSLDLADSANTWTTKSIEG
AKVNSNSSNDYKYSNSVATDINKNLFVIGNSKRNGRVPENGSAGSKMFVVTDASVATPTATYLTGGIFFAGSSGEARAVN
NFNEIVGQVDAETTREVDGSERRHRGFIYPYQATGTDPSRIDLFQNKAWWLDDLTNDGNVSGENNKFRIIDASGINDAGV
ISATAIKCVVGGTPKPYDTTSHNSYCGGAASNAVEKVVAVKLIPIEGKGKSDIQARSTDTAKVDRKGGSLGWFALTVLGL
LGFRRKFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61094; Mature: 60963

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCNKFKLTTVAALVLAATNANAALYKVVEVATPSSIVGASETFGVAIQPAAVTGTESCF
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCCCCCCEEEECCEECCCHHHH
TNATIGGVACDSFKLAGETRNSLEAISYREEVPFAMDAVFQYLQEFDDFKNYCNRELRYS
CCCCCCCEEECCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
TCESWAKTRWEDTWFKERNNLSYVNAKAFIEGGAILDTRNTVINSLDKDANPLGVKSEGT
HHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCCEEEECHHHHHHHHCCCCCCCCCCCCCC
IRNNAIFTTTAKPAGSSETRAWKAITASNGTVYNVGSVSTSETITETSTPDPVFSSKAAI
EECCEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEECCCCCCCCCCCCEEE
WDGTNTKQIDWTRGGTARQGDYYAQGSMRSIAESDTKFYGVGYNTVDGSGDLQDMNASVF
ECCCCCCEEEECCCCCCCCCCEEECCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEE
ISKSLDLADSANTWTTKSIEGAKVNSNSSNDYKYSNSVATDINKNLFVIGNSKRNGRVPE
EEECCCCCCCCCCCEECCCCCCEECCCCCCCEEECCCEECCCCCCEEEEECCCCCCCCCC
NGSAGSKMFVVTDASVATPTATYLTGGIFFAGSSGEARAVNNFNEIVGQVDAETTREVDG
CCCCCCEEEEEECCCCCCCCHHHEECEEEEECCCCCCHHHHHHHHHHHCCCCHHHHCCCC
SERRHRGFIYPYQATGTDPSRIDLFQNKAWWLDDLTNDGNVSGENNKFRIIDASGINDAG
CCHHHCCEEEEEECCCCCCHHEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
VISATAIKCVVGGTPKPYDTTSHNSYCGGAASNAVEKVVAVKLIPIEGKGKSDIQARSTD
EEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEEECCCCCCCCEECCCC
TAKVDRKGGSLGWFALTVLGLLGFRRKFK
CCEEECCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TCNKFKLTTVAALVLAATNANAALYKVVEVATPSSIVGASETFGVAIQPAAVTGTESCF
CCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHCCCCCCCCEEEECCEECCCHHHH
TNATIGGVACDSFKLAGETRNSLEAISYREEVPFAMDAVFQYLQEFDDFKNYCNRELRYS
CCCCCCCEEECCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
TCESWAKTRWEDTWFKERNNLSYVNAKAFIEGGAILDTRNTVINSLDKDANPLGVKSEGT
HHHHHHHCCCCHHHHHHCCCCEEEEEEEEECCCEEEECHHHHHHHHCCCCCCCCCCCCCC
IRNNAIFTTTAKPAGSSETRAWKAITASNGTVYNVGSVSTSETITETSTPDPVFSSKAAI
EECCEEEEEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCEECCCCCCCCCCCCEEE
WDGTNTKQIDWTRGGTARQGDYYAQGSMRSIAESDTKFYGVGYNTVDGSGDLQDMNASVF
ECCCCCCEEEECCCCCCCCCCEEECCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEE
ISKSLDLADSANTWTTKSIEGAKVNSNSSNDYKYSNSVATDINKNLFVIGNSKRNGRVPE
EEECCCCCCCCCCCEECCCCCCEECCCCCCCEEECCCEECCCCCCEEEEECCCCCCCCCC
NGSAGSKMFVVTDASVATPTATYLTGGIFFAGSSGEARAVNNFNEIVGQVDAETTREVDG
CCCCCCEEEEEECCCCCCCCHHHEECEEEEECCCCCCHHHHHHHHHHHCCCCHHHHCCCC
SERRHRGFIYPYQATGTDPSRIDLFQNKAWWLDDLTNDGNVSGENNKFRIIDASGINDAG
CCHHHCCEEEEEECCCCCCHHEEEECCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
VISATAIKCVVGGTPKPYDTTSHNSYCGGAASNAVEKVVAVKLIPIEGKGKSDIQARSTD
EEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEEECCCCCCCCEECCCC
TAKVDRKGGSLGWFALTVLGLLGFRRKFK
CCEEECCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA