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The map label for this gene is 218709378

Identifier: 218709378

GI number: 218709378

Start: 1508748

End: 1510787

Strand: Reverse

Name: 218709378

Synonym: VS_1387

Alternate gene names: NA

Gene position: 1510787-1508748 (Counterclockwise)

Preceding gene: 218709379

Following gene: 218709377

Centisome position: 45.79

GC content: 35.2

Gene sequence:

>2040_bases
ATGAATAGATTCATTAGCTCATTATATGATAAGAGAAATAAAAATATAGCCGACATGGGTTTGCCTGGTGACATTTATGA
TCCCTCAATGGGGTTTCATGATAAATTTGTGTTATGTCGTGATAATAATGGTAATCCTACTGCTATATATGGTCATGATA
CATGGGACTATAACCCATATAGAACATCTGCTAAAAAATTATCCCCATTCAACTTTTCTAGGTTTGATAAGGAAGTATCA
TATTTAAATGGATTACAATATAAGAATGAAGCAAAAAACATACTTGCTTTAATGGGATATACTCGTGGTGGAAAGTTAGG
TAAAATTTCCGCGTCTACTCTACAAGAATACTTTAAATCCCTTATTGACCTAGCAAAATTTTGTGAATTTCAAAATAAAA
ACAACCCTTTCAATAAAGAAATGCGAATTAGCCATTTGTTAAGCAATGTTACATTTTGCCAAGCGTACATTGATTCGGCT
AAAAAGCTAGAAAAAGGTTACCAGCATAAATCAAAACAGTTAAAGAGTATTTTAAATCTACTTAAAAATGTAGATAATAA
TCAACTAGGTTTTTGTCCAGCCTCTACTAAGTTACTAAATTCAATAAGGATTGAGAACCAAGGACACCCTGTTATTCCAT
GTAGAATATACATGAATTTGTTAGACGATTTAGATAGCTATTCAAAAGCCATTTATGAATATCGACATTCTCTACGAGAC
TGGATTTTAAAGTGCAAAGATTATAACTTTGCCATTGGTTACAACGATGAAGGCGAACTTAATTTTAATCAAGAGTGGGA
GAAATCTGGTTTAACCCCCCTAGCTCAGAAACTCGGTTTTGAGTGCTCCGAAAGATGCTCCACTGTAAAGCTTATTTCAT
TTATTCAGTATATTTTAAAGAATCATATACATGCATATACGGGAATGCGGGATCAAGAAATGAACAGGATCAGGCCTGGA
TGTATCTTTGAAGTAGAAAGGGATACCTCTGAAGATTTTATAGAGGAACTAGAAGAAGTCACTATAGTCCAAGTAATATC
AACTACATCTAAGTTTACAGGTAAGTTGACCGAAGCAAGTTGGCTAGCTCCAAGTTGGATACTACCATCGATTAAATCTT
TCGAGGTTATTTGTGAAGCACTTTGTGAGTTATATGAAGTTAATTTCAAAACTGATGTAAATTTACTAATTAGTTCTGGG
ATAATCCGCAGCCCCAAATACAACAGCATTTCTACACCATCATTAGTGAACAATGGTGACACAGGCTTCATGACTCTCTT
ATACAAATTGAACCGTGAAGGTCTAAGTATAAATCAAGAAGACCAAAACGAGCTAATTTCAGCTAATGAGAAAATGGATT
TCAACAAAAGGAAAGAATTCAGAATTGGTCAACCTTGGAGCCTATCGAGCCATCAATGGAGGCGGTCTTTAGCTTTTTAT
GCAGCTAATAGTAAGCTGATAAACCTTCCATCCCTAGCTGCTCAATTTAAACATTTAAGTATTGAGATGGCCAAATACTA
TACAAGAGACAATGAAAAATTCTTGAAAATTTTTCTCGGAAAAAATTTTTCTATAAAACAATCCGATCGAAGTCATGTGA
TGTCTGATTACAAGATGGCAATACCGTTAGCAGTCGTAGATAGATTAATCGCAGATATATTTCTTGATCCAGATACTGTA
TTTGGTGGCGTGGGAAGTTACGCATCAAAACAGAAAGGTTTATTAGTTAGTGGTGACATCACGATTCGTGAAGTTAGGGA
AGACACTTTAAGGGAGGTTAAACAAGGCGCTATAAGCTACAGAGAAACATTGTTAGGTGGCTGTACAAACCCTGACCCTT
GTAACCGTTATCTAGCAGGTGCTGTGACTGCATGCCTTCCTTGTGATGGGAGCGTAATTCAGAAGGATAAGTTAGATAAA
TTCATTCACGATACAAAAAATGAATTAGCTACATACAGTAAGGGATCGGCTGAATACGTTATCACAGAGCATGATTTGAT
TGCAGCTGAAAACTATAAGAATCGAAAAATGAGAACCTAA

Upstream 100 bases:

>100_bases
CAAAACTTGATGAATATATAAATCTAGTTGACGACTTGGGAATTTTAACTCCATATTGGGAGAGAAAGTTAACAAGATAT
GAAGCTATGGGGCTGTACAT

Downstream 100 bases:

>100_bases
CATGTCTAAAAGTGGCCTAAAAAAATGCGAAGAAGCACTGGATAGACTCTTAAATCACTGTCCGGTAAATAGTCAATTCT
CTGCAATCAAAGCTAATGAC

Product: putative site-specific recombinase

Products: NA

Alternate protein names: Integrase; Site-Specific Recombinase; Integrase Family Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 679; Mature: 679

Protein sequence:

>679_residues
MNRFISSLYDKRNKNIADMGLPGDIYDPSMGFHDKFVLCRDNNGNPTAIYGHDTWDYNPYRTSAKKLSPFNFSRFDKEVS
YLNGLQYKNEAKNILALMGYTRGGKLGKISASTLQEYFKSLIDLAKFCEFQNKNNPFNKEMRISHLLSNVTFCQAYIDSA
KKLEKGYQHKSKQLKSILNLLKNVDNNQLGFCPASTKLLNSIRIENQGHPVIPCRIYMNLLDDLDSYSKAIYEYRHSLRD
WILKCKDYNFAIGYNDEGELNFNQEWEKSGLTPLAQKLGFECSERCSTVKLISFIQYILKNHIHAYTGMRDQEMNRIRPG
CIFEVERDTSEDFIEELEEVTIVQVISTTSKFTGKLTEASWLAPSWILPSIKSFEVICEALCELYEVNFKTDVNLLISSG
IIRSPKYNSISTPSLVNNGDTGFMTLLYKLNREGLSINQEDQNELISANEKMDFNKRKEFRIGQPWSLSSHQWRRSLAFY
AANSKLINLPSLAAQFKHLSIEMAKYYTRDNEKFLKIFLGKNFSIKQSDRSHVMSDYKMAIPLAVVDRLIADIFLDPDTV
FGGVGSYASKQKGLLVSGDITIREVREDTLREVKQGAISYRETLLGGCTNPDPCNRYLAGAVTACLPCDGSVIQKDKLDK
FIHDTKNELATYSKGSAEYVITEHDLIAAENYKNRKMRT

Sequences:

>Translated_679_residues
MNRFISSLYDKRNKNIADMGLPGDIYDPSMGFHDKFVLCRDNNGNPTAIYGHDTWDYNPYRTSAKKLSPFNFSRFDKEVS
YLNGLQYKNEAKNILALMGYTRGGKLGKISASTLQEYFKSLIDLAKFCEFQNKNNPFNKEMRISHLLSNVTFCQAYIDSA
KKLEKGYQHKSKQLKSILNLLKNVDNNQLGFCPASTKLLNSIRIENQGHPVIPCRIYMNLLDDLDSYSKAIYEYRHSLRD
WILKCKDYNFAIGYNDEGELNFNQEWEKSGLTPLAQKLGFECSERCSTVKLISFIQYILKNHIHAYTGMRDQEMNRIRPG
CIFEVERDTSEDFIEELEEVTIVQVISTTSKFTGKLTEASWLAPSWILPSIKSFEVICEALCELYEVNFKTDVNLLISSG
IIRSPKYNSISTPSLVNNGDTGFMTLLYKLNREGLSINQEDQNELISANEKMDFNKRKEFRIGQPWSLSSHQWRRSLAFY
AANSKLINLPSLAAQFKHLSIEMAKYYTRDNEKFLKIFLGKNFSIKQSDRSHVMSDYKMAIPLAVVDRLIADIFLDPDTV
FGGVGSYASKQKGLLVSGDITIREVREDTLREVKQGAISYRETLLGGCTNPDPCNRYLAGAVTACLPCDGSVIQKDKLDK
FIHDTKNELATYSKGSAEYVITEHDLIAAENYKNRKMRT
>Mature_679_residues
MNRFISSLYDKRNKNIADMGLPGDIYDPSMGFHDKFVLCRDNNGNPTAIYGHDTWDYNPYRTSAKKLSPFNFSRFDKEVS
YLNGLQYKNEAKNILALMGYTRGGKLGKISASTLQEYFKSLIDLAKFCEFQNKNNPFNKEMRISHLLSNVTFCQAYIDSA
KKLEKGYQHKSKQLKSILNLLKNVDNNQLGFCPASTKLLNSIRIENQGHPVIPCRIYMNLLDDLDSYSKAIYEYRHSLRD
WILKCKDYNFAIGYNDEGELNFNQEWEKSGLTPLAQKLGFECSERCSTVKLISFIQYILKNHIHAYTGMRDQEMNRIRPG
CIFEVERDTSEDFIEELEEVTIVQVISTTSKFTGKLTEASWLAPSWILPSIKSFEVICEALCELYEVNFKTDVNLLISSG
IIRSPKYNSISTPSLVNNGDTGFMTLLYKLNREGLSINQEDQNELISANEKMDFNKRKEFRIGQPWSLSSHQWRRSLAFY
AANSKLINLPSLAAQFKHLSIEMAKYYTRDNEKFLKIFLGKNFSIKQSDRSHVMSDYKMAIPLAVVDRLIADIFLDPDTV
FGGVGSYASKQKGLLVSGDITIREVREDTLREVKQGAISYRETLLGGCTNPDPCNRYLAGAVTACLPCDGSVIQKDKLDK
FIHDTKNELATYSKGSAEYVITEHDLIAAENYKNRKMRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77653; Mature: 77653

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFISSLYDKRNKNIADMGLPGDIYDPSMGFHDKFVLCRDNNGNPTAIYGHDTWDYNPY
CCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCC
RTSAKKLSPFNFSRFDKEVSYLNGLQYKNEAKNILALMGYTRGGKLGKISASTLQEYFKS
CCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LIDLAKFCEFQNKNNPFNKEMRISHLLSNVTFCQAYIDSAKKLEKGYQHKSKQLKSILNL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNVDNNQLGFCPASTKLLNSIRIENQGHPVIPCRIYMNLLDDLDSYSKAIYEYRHSLRD
HHCCCCCCCCCCCHHHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WILKCKDYNFAIGYNDEGELNFNQEWEKSGLTPLAQKLGFECSERCSTVKLISFIQYILK
HHHHHCCCEEEECCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
NHIHAYTGMRDQEMNRIRPGCIFEVERDTSEDFIEELEEVTIVQVISTTSKFTGKLTEAS
HHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
WLAPSWILPSIKSFEVICEALCELYEVNFKTDVNLLISSGIIRSPKYNSISTPSLVNNGD
HCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCC
TGFMTLLYKLNREGLSINQEDQNELISANEKMDFNKRKEFRIGQPWSLSSHQWRRSLAFY
CHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHE
AANSKLINLPSLAAQFKHLSIEMAKYYTRDNEKFLKIFLGKNFSIKQSDRSHVMSDYKMA
ECCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHH
IPLAVVDRLIADIFLDPDTVFGGVGSYASKQKGLLVSGDITIREVREDTLREVKQGAISY
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
RETLLGGCTNPDPCNRYLAGAVTACLPCDGSVIQKDKLDKFIHDTKNELATYSKGSAEYV
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ITEHDLIAAENYKNRKMRT
EECCCEEECCCCCCCCCCC
>Mature Secondary Structure
MNRFISSLYDKRNKNIADMGLPGDIYDPSMGFHDKFVLCRDNNGNPTAIYGHDTWDYNPY
CCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCC
RTSAKKLSPFNFSRFDKEVSYLNGLQYKNEAKNILALMGYTRGGKLGKISASTLQEYFKS
CCCHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LIDLAKFCEFQNKNNPFNKEMRISHLLSNVTFCQAYIDSAKKLEKGYQHKSKQLKSILNL
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNVDNNQLGFCPASTKLLNSIRIENQGHPVIPCRIYMNLLDDLDSYSKAIYEYRHSLRD
HHCCCCCCCCCCCHHHHHHHHHEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WILKCKDYNFAIGYNDEGELNFNQEWEKSGLTPLAQKLGFECSERCSTVKLISFIQYILK
HHHHHCCCEEEECCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH
NHIHAYTGMRDQEMNRIRPGCIFEVERDTSEDFIEELEEVTIVQVISTTSKFTGKLTEAS
HHHHHHCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
WLAPSWILPSIKSFEVICEALCELYEVNFKTDVNLLISSGIIRSPKYNSISTPSLVNNGD
HCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCC
TGFMTLLYKLNREGLSINQEDQNELISANEKMDFNKRKEFRIGQPWSLSSHQWRRSLAFY
CHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHE
AANSKLINLPSLAAQFKHLSIEMAKYYTRDNEKFLKIFLGKNFSIKQSDRSHVMSDYKMA
ECCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCCCCHHHHHHHHHHH
IPLAVVDRLIADIFLDPDTVFGGVGSYASKQKGLLVSGDITIREVREDTLREVKQGAISY
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
RETLLGGCTNPDPCNRYLAGAVTACLPCDGSVIQKDKLDKFIHDTKNELATYSKGSAEYV
HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
ITEHDLIAAENYKNRKMRT
EECCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA