Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218709248

Identifier: 218709248

GI number: 218709248

Start: 1352744

End: 1353358

Strand: Reverse

Name: 218709248

Synonym: VS_1255

Alternate gene names: NA

Gene position: 1353358-1352744 (Counterclockwise)

Preceding gene: 218709251

Following gene: 218709247

Centisome position: 41.02

GC content: 43.74

Gene sequence:

>615_bases
ATGAAGAAATACGTCCCAATCTTAATTGCTCTTAGTACGATGTCTTCTATGAGCTATGCAGCCACCAGCAATGATGATGT
TGTTGTTGACTATTTGCAGATGCGAAAAGGCGTGGCTTACCAAGTCAACCATTCAAAGCCATTTACTGGCCAATTTGAAG
AGAAGTTCGATAACGGCCAAATCGCGACCAAAGCCCAATTTTCCGATGGTCTAGAACTTGGATTAGAAACAAATTGGTAT
CAGAATGGCCAAGTCGCTTCTAAAGTGAATTACGTTAAAGGTAAACTGCAAGGCAAGGCTGAAACCTGGTATCCCAACGG
TCAGAAAAAAGCTGAGCTCAGCTATAAAGACAATGAGCTGTCGGGTGCTGGCTCTCGTTGGTATCCGAATGGCGAACAAA
GCCTAACAGCCGAATTCAGTCACGGGAAAACAAATGGATTAGTAACGAACTACTACCCTAATGGCAATAAGGCTAGCCAA
GCGAAATTTGATGAAGGCGAAGTAGCAAACGGGAAACTCACTCGCTGGAATACTAACGGTGACAAGGTTGAAGAACTGAC
CTTTAAAGACCACAAAATCACGTCTAGACAAGTTTGGATGCCGACAGAAAGCTAG

Upstream 100 bases:

>100_bases
AAACTTGAAAACCACTAATAAAAGCTGACAGTCTTTCACGGAAGTGAAATGCTTTTAACACACCGATTACACTTTCCCCG
TCCATTAAAAAGGTGTCATT

Downstream 100 bases:

>100_bases
TCCAGTATAAGTTTGTGCTAAGGGCTAGTTTACTGAGACTGTCCTAAATCCTGTATAATTGGCCCATAGCACTGCTCTTC
CTGAGCGCATATTCCTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKKYVPILIALSTMSSMSYAATSNDDVVVDYLQMRKGVAYQVNHSKPFTGQFEEKFDNGQIATKAQFSDGLELGLETNWY
QNGQVASKVNYVKGKLQGKAETWYPNGQKKAELSYKDNELSGAGSRWYPNGEQSLTAEFSHGKTNGLVTNYYPNGNKASQ
AKFDEGEVANGKLTRWNTNGDKVEELTFKDHKITSRQVWMPTES

Sequences:

>Translated_204_residues
MKKYVPILIALSTMSSMSYAATSNDDVVVDYLQMRKGVAYQVNHSKPFTGQFEEKFDNGQIATKAQFSDGLELGLETNWY
QNGQVASKVNYVKGKLQGKAETWYPNGQKKAELSYKDNELSGAGSRWYPNGEQSLTAEFSHGKTNGLVTNYYPNGNKASQ
AKFDEGEVANGKLTRWNTNGDKVEELTFKDHKITSRQVWMPTES
>Mature_204_residues
MKKYVPILIALSTMSSMSYAATSNDDVVVDYLQMRKGVAYQVNHSKPFTGQFEEKFDNGQIATKAQFSDGLELGLETNWY
QNGQVASKVNYVKGKLQGKAETWYPNGQKKAELSYKDNELSGAGSRWYPNGEQSLTAEFSHGKTNGLVTNYYPNGNKASQ
AKFDEGEVANGKLTRWNTNGDKVEELTFKDHKITSRQVWMPTES

Specific function: Unknown

COG id: COG2849

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22863; Mature: 22863

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYVPILIALSTMSSMSYAATSNDDVVVDYLQMRKGVAYQVNHSKPFTGQFEEKFDNGQ
CCCCEEEEEEEEHHCCCEEEECCCCCEEEEEHHHHCCCEEEECCCCCCCCCHHHHCCCCC
IATKAQFSDGLELGLETNWYQNGQVASKVNYVKGKLQGKAETWYPNGQKKAELSYKDNEL
EEEEEECCCCEEECEECCCCCCCCHHHHEEEEEEEECCCEEEECCCCCCEEEEEECCCCC
SGAGSRWYPNGEQSLTAEFSHGKTNGLVTNYYPNGNKASQAKFDEGEVANGKLTRWNTNG
CCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
DKVEELTFKDHKITSRQVWMPTES
CEEEEEEECCCCCCCCEEECCCCC
>Mature Secondary Structure
MKKYVPILIALSTMSSMSYAATSNDDVVVDYLQMRKGVAYQVNHSKPFTGQFEEKFDNGQ
CCCCEEEEEEEEHHCCCEEEECCCCCEEEEEHHHHCCCEEEECCCCCCCCCHHHHCCCCC
IATKAQFSDGLELGLETNWYQNGQVASKVNYVKGKLQGKAETWYPNGQKKAELSYKDNEL
EEEEEECCCCEEECEECCCCCCCCHHHHEEEEEEEECCCEEEECCCCCCEEEEEECCCCC
SGAGSRWYPNGEQSLTAEFSHGKTNGLVTNYYPNGNKASQAKFDEGEVANGKLTRWNTNG
CCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCC
DKVEELTFKDHKITSRQVWMPTES
CEEEEEEECCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA