Click here to switch to the map view.

The map label for this gene is 218709207

Identifier: 218709207

GI number: 218709207

Start: 1289123

End: 1289869

Strand: Reverse

Name: 218709207

Synonym: VS_1214

Alternate gene names: NA

Gene position: 1289869-1289123 (Counterclockwise)

Preceding gene: 218709208

Following gene: 218709204

Centisome position: 39.1

GC content: 43.51

Gene sequence:

>747_bases
TTGATGACTAATAGCGATACTATGTTTCTGACACCTTACTTTTCTACTGAAGACAATCAATTTCAATTCACTCGTGAACA
GGCTAGCCACTTTGCTAAAAAAGTAGCTGCTGACTTCAACCCAATTCACGATGAAGACAACAAGCGCTTCTGCGTGCCTG
GCGATCTTTTGTTTGCAGTACTTCTGCAAAAAGAAGGCATCAGCCAAAAAATGCGTTTTGATTTTTCAGGTATGGTGGGT
AACGGTATTGCGCTAAGCGTTGACAACAAGTGTGAGAAAGAAAGCTCACTGGTTGACGAGAAAGGCAAAGAGTACCTACA
CATGTCTTGTGAAGGTGAAAAGAGCCACGATCAAGCATTCATCGAACACGTAGTAACAAACTACGTTAAGTTCTCAGGCA
TGAACTTCCCACACATCATGGTTCCTCTTATGGAAGAACAACAAATGATGATCAACTGCCAACGTCCTCTTGTGATTTAC
GAGAGCATGGAAGTTGAATTTACTCGTCTAGACCTATCTCACCCAGAAGTTGAATTCTCAGGTGCGACTTTTGATGTTGA
AGGCAAGCGTGGCATCGTGACACTGAACTTTGATTTCAAAGAAGACGGTGAAGTAGTCGGTAAAGGCGTGAAACGCATGG
TAGCAAGTGGCCTTAAGCCATACGACCAAGCTTCTGTAGACGACCTAGTAAACCGCTTCAACGAACGTAAAGAGATGTTT
CTAGCTCAGTTCGCAGCTGCCGCTTAA

Upstream 100 bases:

>100_bases
TCTCACCAGCCCGCCTTCTCATCAATCTCCCTCCTTTTCGGCCCTCGTAAACTGGATAGACCATTAAAACCAAGTTAGTT
AGCTATAATCCCCGCCAGAT

Downstream 100 bases:

>100_bases
TCAGCATCCTTATTTACATCACTTGATGTAAACAGCTAAAAACAAGATCAATAAAGCCCAGCTTGGTATCACAAGCTGGG
CTTTTTCATTTCGATGACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MMTNSDTMFLTPYFSTEDNQFQFTREQASHFAKKVAADFNPIHDEDNKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVG
NGIALSVDNKCEKESSLVDEKGKEYLHMSCEGEKSHDQAFIEHVVTNYVKFSGMNFPHIMVPLMEEQQMMINCQRPLVIY
ESMEVEFTRLDLSHPEVEFSGATFDVEGKRGIVTLNFDFKEDGEVVGKGVKRMVASGLKPYDQASVDDLVNRFNERKEMF
LAQFAAAA

Sequences:

>Translated_248_residues
MMTNSDTMFLTPYFSTEDNQFQFTREQASHFAKKVAADFNPIHDEDNKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVG
NGIALSVDNKCEKESSLVDEKGKEYLHMSCEGEKSHDQAFIEHVVTNYVKFSGMNFPHIMVPLMEEQQMMINCQRPLVIY
ESMEVEFTRLDLSHPEVEFSGATFDVEGKRGIVTLNFDFKEDGEVVGKGVKRMVASGLKPYDQASVDDLVNRFNERKEMF
LAQFAAAA
>Mature_248_residues
MMTNSDTMFLTPYFSTEDNQFQFTREQASHFAKKVAADFNPIHDEDNKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVG
NGIALSVDNKCEKESSLVDEKGKEYLHMSCEGEKSHDQAFIEHVVTNYVKFSGMNFPHIMVPLMEEQQMMINCQRPLVIY
ESMEVEFTRLDLSHPEVEFSGATFDVEGKRGIVTLNFDFKEDGEVVGKGVKRMVASGLKPYDQASVDDLVNRFNERKEMF
LAQFAAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28223; Mature: 28223

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTNSDTMFLTPYFSTEDNQFQFTREQASHFAKKVAADFNPIHDEDNKRFCVPGDLLFAV
CCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHH
LLQKEGISQKMRFDFSGMVGNGIALSVDNKCEKESSLVDEKGKEYLHMSCEGEKSHDQAF
HHHHCCCCHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHH
IEHVVTNYVKFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFTRLDLSHPEVEFS
HHHHHHHHHHHCCCCCCEEEEEHHHCCHHHEECCCCEEEEECCEEEEEEEECCCCCEEEC
GATFDVEGKRGIVTLNFDFKEDGEVVGKGVKRMVASGLKPYDQASVDDLVNRFNERKEMF
CCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LAQFAAAA
HHHHHHCC
>Mature Secondary Structure
MMTNSDTMFLTPYFSTEDNQFQFTREQASHFAKKVAADFNPIHDEDNKRFCVPGDLLFAV
CCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHH
LLQKEGISQKMRFDFSGMVGNGIALSVDNKCEKESSLVDEKGKEYLHMSCEGEKSHDQAF
HHHHCCCCHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHH
IEHVVTNYVKFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFTRLDLSHPEVEFS
HHHHHHHHHHHCCCCCCEEEEEHHHCCHHHEECCCCEEEEECCEEEEEEEECCCCCEEEC
GATFDVEGKRGIVTLNFDFKEDGEVVGKGVKRMVASGLKPYDQASVDDLVNRFNERKEMF
CCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LAQFAAAA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA