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The map label for this gene is yedU [C]

Identifier: 218709186

GI number: 218709186

Start: 1264930

End: 1265601

Strand: Reverse

Name: yedU [C]

Synonym: VS_1193

Alternate gene names: 218709186

Gene position: 1265601-1264930 (Counterclockwise)

Preceding gene: 218709189

Following gene: 218709183

Centisome position: 38.36

GC content: 47.17

Gene sequence:

>672_bases
ATGAAAAAAATACTAATACCTGTAACTAACCACGCAACACTAGGCGATACAGACCAAGCGAACGGTACTTACGCTCCAGA
ACTGACTCATGCACTGAAAGAGATCATTGCTGCGGGTTTTGAGTACGACATCGCGTCTATCAAGGGTGGTAAAGGTCCAC
TGTATGGAACCGATATTGAAGGTGATTCAGTAAACGCAGAGATCTTGGCTGACGATGACTTCCAGAACCGCATTAACAAC
ACGATTCCTGTAAGCCAAGTAAACGTAGAAAGCTACGATGCCATCTTCTACCCAGGTGGATTCGGCCTACTTTCTGACTT
AGCAACCGACGAGCAATTCGCAACGATTGCAGCTAAACATTATGAAGATGGCGGTGTGATCGCATCAGTATGTCACGGCC
CAGCAGCACTGCTTCCGATTGTTCTAAGCAATGGCGAGAAGCTACTAAGCTCTAAATCGGTGACTGGCTTTACTCGTGAA
GAAGAGATCGACTTTGGCACCATCAACGACATTCCGTTTCTACTAGAAGAGTCTCTTGCTCGCAGCGCTGCGCGTTTCAA
CAAGGTTCAACCTTGGCATGAGCTTGTAATTGTTGATGAGCGAGTGATTACCGGCCAAAACCCAACCAGTGCTCACGCAG
TAGGTGCAGCTCTAGTTAAGCAACTGTCTTAG

Upstream 100 bases:

>100_bases
TTACAGGTAACGAAACAGCGGTATCTAAATTGAAAGCTTTGGTTTTCTAAATAAAAGCCACGACGCTGAAACCAAACAAA
CGTGCTCAAAGGAACGAATC

Downstream 100 bases:

>100_bases
TTAAATCAGAAACTTAATCGAGTAACGGTTTTAGTCTTAGTAACCGTCCTAATAGAATAACTGCCGTTAAACAGATATAA
GCTCGATCAAATAAAAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; Amidotransferase; PFPI-Like Cystiene Protease; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; NonF Protein; ThiJ Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKKILIPVTNHATLGDTDQANGTYAPELTHALKEIIAAGFEYDIASIKGGKGPLYGTDIEGDSVNAEILADDDFQNRINN
TIPVSQVNVESYDAIFYPGGFGLLSDLATDEQFATIAAKHYEDGGVIASVCHGPAALLPIVLSNGEKLLSSKSVTGFTRE
EEIDFGTINDIPFLLEESLARSAARFNKVQPWHELVIVDERVITGQNPTSAHAVGAALVKQLS

Sequences:

>Translated_223_residues
MKKILIPVTNHATLGDTDQANGTYAPELTHALKEIIAAGFEYDIASIKGGKGPLYGTDIEGDSVNAEILADDDFQNRINN
TIPVSQVNVESYDAIFYPGGFGLLSDLATDEQFATIAAKHYEDGGVIASVCHGPAALLPIVLSNGEKLLSSKSVTGFTRE
EEIDFGTINDIPFLLEESLARSAARFNKVQPWHELVIVDERVITGQNPTSAHAVGAALVKQLS
>Mature_223_residues
MKKILIPVTNHATLGDTDQANGTYAPELTHALKEIIAAGFEYDIASIKGGKGPLYGTDIEGDSVNAEILADDDFQNRINN
TIPVSQVNVESYDAIFYPGGFGLLSDLATDEQFATIAAKHYEDGGVIASVCHGPAALLPIVLSNGEKLLSSKSVTGFTRE
EEIDFGTINDIPFLLEESLARSAARFNKVQPWHELVIVDERVITGQNPTSAHAVGAALVKQLS

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=237, Percent_Identity=30.379746835443, Blast_Score=89, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6323984, Length=225, Percent_Identity=28.4444444444444, Blast_Score=79, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6324967, Length=225, Percent_Identity=28.4444444444444, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6324975, Length=225, Percent_Identity=28.4444444444444, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23868; Mature: 23868

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIPVTNHATLGDTDQANGTYAPELTHALKEIIAAGFEYDIASIKGGKGPLYGTDIE
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC
GDSVNAEILADDDFQNRINNTIPVSQVNVESYDAIFYPGGFGLLSDLATDEQFATIAAKH
CCCCCEEEEECCHHHHHCCCCCCCEEECCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHH
YEDGGVIASVCHGPAALLPIVLSNGEKLLSSKSVTGFTREEEIDFGTINDIPFLLEESLA
CCCCCEEEEECCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RSAARFNKVQPWHELVIVDERVITGQNPTSAHAVGAALVKQLS
HHHHHHCCCCCHHHEEEEECEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILIPVTNHATLGDTDQANGTYAPELTHALKEIIAAGFEYDIASIKGGKGPLYGTDIE
CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCC
GDSVNAEILADDDFQNRINNTIPVSQVNVESYDAIFYPGGFGLLSDLATDEQFATIAAKH
CCCCCEEEEECCHHHHHCCCCCCCEEECCCCCCEEEECCCHHHHHHHCCCHHHHHHHHHH
YEDGGVIASVCHGPAALLPIVLSNGEKLLSSKSVTGFTREEEIDFGTINDIPFLLEESLA
CCCCCEEEEECCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
RSAARFNKVQPWHELVIVDERVITGQNPTSAHAVGAALVKQLS
HHHHHHCCCCCHHHEEEEECEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA