| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is rhlE [H]
Identifier: 218709165
GI number: 218709165
Start: 1240625
End: 1241881
Strand: Reverse
Name: rhlE [H]
Synonym: VS_1172
Alternate gene names: 218709165
Gene position: 1241881-1240625 (Counterclockwise)
Preceding gene: 218709168
Following gene: 218709164
Centisome position: 37.64
GC content: 45.43
Gene sequence:
>1257_bases TTGATACTTGGTTCATTTATGTCATTTGATAGCCTAGCCCTTAACCCAAAAACCGTCTCCGCGATCCCATCTCAATTCAA TAAGCCGACAGAGATACAGCAAGCGGTAATTCCTACAATTATTGCGGGGAAAGACGTGCTGGCGTTGGCTCAAACGGGTA GCGGAAAAACGTTGGCATTTGGCTTACCTTTGCTGAACAGCATCAAGCATGATGTAAATGAACTACAAGCGATAATCATT GTTCCAACCCGTGAACTTGCCTCTCAAGTAGCCAAAGCACTAGAACCCATCGCAACCACACTTGATATCAAAACGGTGAC ACTGACTGGTGGAGTTGATATCGAGATCCAGCAACAGCAATTGTTAGAAAAGCCACAACTCGTGATCGCAACTCCTGGCC GCCTACATGCCGTTATTCAAGAGAACAAGCTCGAGCTAACCCAATGCAAGTCTATAATTCTTGATGAGGCAGACCGTTTA CTCGACATGGGATTTTGGCCAGATGTTCAAACCATTATTTCTGCTCTTCCTAAAAAGCATCAAACACTGCTGTTTTCGGC TACGCTGCCAAAAGAGCTGATCAGTCAGACTGAGGCGCTTCTTGTTAATCCAGTAAAGGTCACGACGCATCAAGAAAACA GTGTGGTCGCGGCTATTGAAGAAACTCTGTACTTAGTGAACAAAGGCAGTAAAGCTCAAGCGCTGATCGCCCTACTCAAT CAGCACGCATGGTCGCAGGTATTGGTATTTATTGGCGCAAAAGACAATGCAGATGCATTAACCAAGCGATTGAGTAAAGC CAAAATAAGTGTGAATGCGCTACACGGAAATAAGAACCAAGAAGAGCGAGAGCAAGCATTAGAGAGTTTCAAGAATGGCA AGACTCGTGTGCTTATCGCCACCGACGTTATGGCTAGAGGCATCCATATTGATCAACTACCTGTCGTAATTAACTTTGAT TTGCCATCGCATTCGGCGACTTACGTACACCGAGTTGGTCGCACAGCAAGAGCAGGAAGTACTGGCAGCGCGATCTCTCT GGTTAGCCACAGCGAAACTGACTACCTGAATGCAATTCGTACTCTGACCAATAAACCTCTTATGCTACAAGCGTTGGAAG GCTTCCCAGTTACAGACAAACCTGCATCTGAAGCGACAGCTCGCAAACGTCCGCCTAAAGACAAAATGGCTAACCGAAGA ACCGCAAAAAAGAAGAGTGTTAAGCAATTTAAGAGCAAACCAAGTTCTTCGAAATAA
Upstream 100 bases:
>100_bases CTAACATACATAATTCACGCATATAATGAGAGCGTTTATCGTGTAACGTTACAAAACTGATTTTCTAACATTTGCAGCCC TGTTAGACTCCACCTCCCTT
Downstream 100 bases:
>100_bases CCTGTTATTCAACGTAACCACAGAAAATCGAATAGCCCAGTTTGCACTGGGCTTTTTTATGGTTGATCTCATATTAGCAG GACCAAAATACAAACTTATG
Product: putative ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MILGSFMSFDSLALNPKTVSAIPSQFNKPTEIQQAVIPTIIAGKDVLALAQTGSGKTLAFGLPLLNSIKHDVNELQAIII VPTRELASQVAKALEPIATTLDIKTVTLTGGVDIEIQQQQLLEKPQLVIATPGRLHAVIQENKLELTQCKSIILDEADRL LDMGFWPDVQTIISALPKKHQTLLFSATLPKELISQTEALLVNPVKVTTHQENSVVAAIEETLYLVNKGSKAQALIALLN QHAWSQVLVFIGAKDNADALTKRLSKAKISVNALHGNKNQEEREQALESFKNGKTRVLIATDVMARGIHIDQLPVVINFD LPSHSATYVHRVGRTARAGSTGSAISLVSHSETDYLNAIRTLTNKPLMLQALEGFPVTDKPASEATARKRPPKDKMANRR TAKKKSVKQFKSKPSSSK
Sequences:
>Translated_418_residues MILGSFMSFDSLALNPKTVSAIPSQFNKPTEIQQAVIPTIIAGKDVLALAQTGSGKTLAFGLPLLNSIKHDVNELQAIII VPTRELASQVAKALEPIATTLDIKTVTLTGGVDIEIQQQQLLEKPQLVIATPGRLHAVIQENKLELTQCKSIILDEADRL LDMGFWPDVQTIISALPKKHQTLLFSATLPKELISQTEALLVNPVKVTTHQENSVVAAIEETLYLVNKGSKAQALIALLN QHAWSQVLVFIGAKDNADALTKRLSKAKISVNALHGNKNQEEREQALESFKNGKTRVLIATDVMARGIHIDQLPVVINFD LPSHSATYVHRVGRTARAGSTGSAISLVSHSETDYLNAIRTLTNKPLMLQALEGFPVTDKPASEATARKRPPKDKMANRR TAKKKSVKQFKSKPSSSK >Mature_418_residues MILGSFMSFDSLALNPKTVSAIPSQFNKPTEIQQAVIPTIIAGKDVLALAQTGSGKTLAFGLPLLNSIKHDVNELQAIII VPTRELASQVAKALEPIATTLDIKTVTLTGGVDIEIQQQQLLEKPQLVIATPGRLHAVIQENKLELTQCKSIILDEADRL LDMGFWPDVQTIISALPKKHQTLLFSATLPKELISQTEALLVNPVKVTTHQENSVVAAIEETLYLVNKGSKAQALIALLN QHAWSQVLVFIGAKDNADALTKRLSKAKISVNALHGNKNQEEREQALESFKNGKTRVLIATDVMARGIHIDQLPVVINFD LPSHSATYVHRVGRTARAGSTGSAISLVSHSETDYLNAIRTLTNKPLMLQALEGFPVTDKPASEATARKRPPKDKMANRR TAKKKSVKQFKSKPSSSK
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI262118318, Length=345, Percent_Identity=40, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI262231852, Length=345, Percent_Identity=40, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI13518015, Length=345, Percent_Identity=40, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI216548263, Length=345, Percent_Identity=40, Blast_Score=251, Evalue=6e-67, Organism=Homo sapiens, GI20149629, Length=364, Percent_Identity=36.2637362637363, Blast_Score=249, Evalue=3e-66, Organism=Homo sapiens, GI7661920, Length=354, Percent_Identity=33.6158192090396, Blast_Score=238, Evalue=6e-63, Organism=Homo sapiens, GI51094101, Length=367, Percent_Identity=38.4196185286104, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI164419743, Length=367, Percent_Identity=38.4196185286104, Blast_Score=235, Evalue=6e-62, Organism=Homo sapiens, GI41327771, Length=382, Percent_Identity=34.2931937172775, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI41327773, Length=344, Percent_Identity=35.1744186046512, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI21071032, Length=337, Percent_Identity=36.2017804154303, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI301171467, Length=349, Percent_Identity=36.676217765043, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI301171475, Length=349, Percent_Identity=36.676217765043, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI87196351, Length=349, Percent_Identity=36.676217765043, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI148613856, Length=336, Percent_Identity=35.1190476190476, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI38201710, Length=336, Percent_Identity=35.1190476190476, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=36.2880886426593, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI31542656, Length=352, Percent_Identity=37.5, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI169881239, Length=349, Percent_Identity=36.1031518624642, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI13514809, Length=349, Percent_Identity=36.1031518624642, Blast_Score=217, Evalue=1e-56, Organism=Homo sapiens, GI41327776, Length=364, Percent_Identity=34.6153846153846, Blast_Score=215, Evalue=5e-56, Organism=Homo sapiens, GI4503529, Length=360, Percent_Identity=33.3333333333333, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=33.3333333333333, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI222352149, Length=363, Percent_Identity=34.9862258953168, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI83700235, Length=360, Percent_Identity=33.0555555555556, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI188035877, Length=332, Percent_Identity=35.8433734939759, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI164664518, Length=335, Percent_Identity=33.7313432835821, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI45446747, Length=340, Percent_Identity=34.1176470588235, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI45446743, Length=340, Percent_Identity=34.1176470588235, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI21040371, Length=359, Percent_Identity=32.8690807799443, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=31.9327731092437, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=31.9327731092437, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=34.4632768361582, Blast_Score=195, Evalue=6e-50, Organism=Homo sapiens, GI41327779, Length=388, Percent_Identity=34.7938144329897, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI50659095, Length=338, Percent_Identity=32.8402366863905, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI55749865, Length=334, Percent_Identity=31.1377245508982, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI38569505, Length=345, Percent_Identity=33.0434782608696, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI38569503, Length=345, Percent_Identity=33.0434782608696, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI8922886, Length=379, Percent_Identity=32.1899736147757, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI6005743, Length=379, Percent_Identity=32.1899736147757, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI9506931, Length=427, Percent_Identity=28.1030444964871, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI38327634, Length=376, Percent_Identity=31.6489361702128, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=29.041095890411, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI13129006, Length=350, Percent_Identity=31.7142857142857, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI62241022, Length=355, Percent_Identity=32.3943661971831, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI164419732, Length=349, Percent_Identity=31.5186246418338, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=28.7769784172662, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=28.9405684754522, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI62241024, Length=335, Percent_Identity=32.2388059701493, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI9966805, Length=306, Percent_Identity=32.0261437908497, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.0595238095238, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI154759257, Length=386, Percent_Identity=30.0518134715026, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=33.6405529953917, Blast_Score=108, Evalue=9e-24, Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=40.4255319148936, Blast_Score=293, Evalue=1e-80, Organism=Escherichia coli, GI87082221, Length=358, Percent_Identity=37.4301675977654, Blast_Score=254, Evalue=8e-69, Organism=Escherichia coli, GI1787605, Length=331, Percent_Identity=40.4833836858006, Blast_Score=239, Evalue=2e-64, Organism=Escherichia coli, GI1788930, Length=370, Percent_Identity=36.4864864864865, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=34.4919786096257, Blast_Score=199, Evalue=3e-52, Organism=Escherichia coli, GI48994977, Length=355, Percent_Identity=23.0985915492958, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71987143, Length=356, Percent_Identity=33.9887640449438, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995724, Length=354, Percent_Identity=33.8983050847458, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17555296, Length=341, Percent_Identity=36.6568914956012, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17507121, Length=354, Percent_Identity=33.6158192090396, Blast_Score=237, Evalue=7e-63, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=35.5437665782493, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71999646, Length=364, Percent_Identity=35.4395604395604, Blast_Score=231, Evalue=5e-61, Organism=Caenorhabditis elegans, GI71999644, Length=364, Percent_Identity=35.4395604395604, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI115533224, Length=345, Percent_Identity=37.3913043478261, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI86570094, Length=358, Percent_Identity=36.3128491620112, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=36.6391184573003, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=36.6391184573003, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=36.6391184573003, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=31.3559322033898, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71982858, Length=359, Percent_Identity=32.5905292479109, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI17507881, Length=353, Percent_Identity=33.7110481586402, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17507877, Length=354, Percent_Identity=34.180790960452, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17552642, Length=383, Percent_Identity=33.420365535248, Blast_Score=201, Evalue=4e-52, Organism=Caenorhabditis elegans, GI17507945, Length=349, Percent_Identity=33.2378223495702, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17509811, Length=364, Percent_Identity=33.5164835164835, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71995718, Length=348, Percent_Identity=35.9195402298851, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17510559, Length=407, Percent_Identity=31.2039312039312, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI115532548, Length=397, Percent_Identity=30.7304785894207, Blast_Score=194, Evalue=5e-50, Organism=Caenorhabditis elegans, GI115532546, Length=353, Percent_Identity=32.0113314447592, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17507879, Length=391, Percent_Identity=32.2250639386189, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=29.7142857142857, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17556951, Length=356, Percent_Identity=31.7415730337079, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI32564046, Length=416, Percent_Identity=31.4903846153846, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17507641, Length=415, Percent_Identity=31.566265060241, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17537549, Length=340, Percent_Identity=31.7647058823529, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17505370, Length=334, Percent_Identity=34.4311377245509, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=28.9124668435013, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=31.5363881401617, Blast_Score=164, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17536099, Length=392, Percent_Identity=31.3775510204082, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17536101, Length=392, Percent_Identity=31.3775510204082, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17553716, Length=335, Percent_Identity=28.955223880597, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=31.3775510204082, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI193208216, Length=373, Percent_Identity=30.2949061662198, Blast_Score=150, Evalue=9e-37, Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=24.220623501199, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71997889, Length=378, Percent_Identity=27.5132275132275, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71982862, Length=190, Percent_Identity=35.7894736842105, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=26.6666666666667, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=23.7536656891496, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=40.8163265306122, Blast_Score=96, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6321856, Length=366, Percent_Identity=39.8907103825137, Blast_Score=277, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=38.9502762430939, Blast_Score=247, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6320224, Length=357, Percent_Identity=34.453781512605, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=35.4929577464789, Blast_Score=219, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6325138, Length=361, Percent_Identity=34.6260387811634, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6324778, Length=355, Percent_Identity=34.3661971830986, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6320041, Length=346, Percent_Identity=33.2369942196532, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6321963, Length=378, Percent_Identity=35.978835978836, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6320119, Length=354, Percent_Identity=34.180790960452, Blast_Score=211, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=358, Percent_Identity=34.3575418994413, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6322323, Length=358, Percent_Identity=34.3575418994413, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=34.7222222222222, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=32.6923076923077, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=360, Percent_Identity=30.8333333333333, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=360, Percent_Identity=33.3333333333333, Blast_Score=182, Evalue=7e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=360, Percent_Identity=32.5, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=383, Percent_Identity=33.9425587467363, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6324620, Length=374, Percent_Identity=32.3529411764706, Blast_Score=176, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=32.6145552560647, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6319618, Length=400, Percent_Identity=31.5, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320173, Length=295, Percent_Identity=35.5932203389831, Blast_Score=159, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=382, Percent_Identity=29.3193717277487, Blast_Score=149, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=27.3170731707317, Blast_Score=142, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=354, Percent_Identity=32.2033898305085, Blast_Score=131, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=28.4403669724771, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=397, Percent_Identity=24.4332493702771, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24585582, Length=369, Percent_Identity=36.8563685636856, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=37.8453038674033, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24584399, Length=333, Percent_Identity=39.9399399399399, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24584994, Length=362, Percent_Identity=37.5690607734807, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI28574962, Length=344, Percent_Identity=36.3372093023256, Blast_Score=231, Evalue=5e-61, Organism=Drosophila melanogaster, GI24645031, Length=354, Percent_Identity=32.7683615819209, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=36.0433604336043, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI28575014, Length=364, Percent_Identity=34.8901098901099, Blast_Score=219, Evalue=4e-57, Organism=Drosophila melanogaster, GI24583281, Length=345, Percent_Identity=32.7536231884058, Blast_Score=217, Evalue=9e-57, Organism=Drosophila melanogaster, GI24583279, Length=345, Percent_Identity=32.7536231884058, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24644479, Length=336, Percent_Identity=33.9285714285714, Blast_Score=215, Evalue=4e-56, Organism=Drosophila melanogaster, GI281361218, Length=336, Percent_Identity=33.9285714285714, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24644481, Length=336, Percent_Identity=33.9285714285714, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI24644483, Length=336, Percent_Identity=33.9285714285714, Blast_Score=214, Evalue=6e-56, Organism=Drosophila melanogaster, GI24644487, Length=336, Percent_Identity=33.9285714285714, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI45551833, Length=336, Percent_Identity=33.9285714285714, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI24644485, Length=336, Percent_Identity=33.9285714285714, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI17977678, Length=335, Percent_Identity=35.2238805970149, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24582080, Length=358, Percent_Identity=32.6815642458101, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24582078, Length=358, Percent_Identity=32.6815642458101, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI17136248, Length=358, Percent_Identity=32.6815642458101, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24582075, Length=358, Percent_Identity=32.6815642458101, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI21355075, Length=342, Percent_Identity=32.7485380116959, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=32.7777777777778, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI17136814, Length=348, Percent_Identity=33.9080459770115, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI21356161, Length=362, Percent_Identity=34.8066298342541, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=30.5322128851541, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.6526610644258, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.6526610644258, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.6526610644258, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI17647335, Length=357, Percent_Identity=29.9719887955182, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24666101, Length=345, Percent_Identity=32.1739130434783, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI21355559, Length=360, Percent_Identity=36.6666666666667, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI28571808, Length=367, Percent_Identity=32.425068119891, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI28571809, Length=367, Percent_Identity=32.425068119891, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI281365720, Length=295, Percent_Identity=34.5762711864407, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=32.620320855615, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=31.0030395136778, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI17136666, Length=412, Percent_Identity=28.1553398058252, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24643725, Length=385, Percent_Identity=28.3116883116883, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI19920478, Length=340, Percent_Identity=26.4705882352941, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI20130173, Length=346, Percent_Identity=28.3236994219653, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI18859659, Length=238, Percent_Identity=32.3529411764706, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI28571338, Length=238, Percent_Identity=32.3529411764706, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24640164, Length=347, Percent_Identity=22.7665706051873, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 45500; Mature: 45500
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGSFMSFDSLALNPKTVSAIPSQFNKPTEIQQAVIPTIIAGKDVLALAQTGSGKTLAF CEECCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE GLPLLNSIKHDVNELQAIIIVPTRELASQVAKALEPIATTLDIKTVTLTGGVDIEIQQQQ CCHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEECHHH LLEKPQLVIATPGRLHAVIQENKLELTQCKSIILDEADRLLDMGFWPDVQTIISALPKKH HHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC QTLLFSATLPKELISQTEALLVNPVKVTTHQENSVVAAIEETLYLVNKGSKAQALIALLN CEEEEECCCCHHHHCCCHHHEECCEEEEECCCCCEEHHHHHHHHEECCCCHHHHHHHHHH QHAWSQVLVFIGAKDNADALTKRLSKAKISVNALHGNKNQEEREQALESFKNGKTRVLIA HHCCEEEEEEEECCCCHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE TDVMARGIHIDQLPVVINFDLPSHSATYVHRVGRTARAGSTGSAISLVSHSETDYLNAIR EHHHHCCCEEECCCEEEEECCCCCCHHHHHHHCCHHCCCCCCCEEEEEECCCHHHHHHHH TLTNKPLMLQALEGFPVTDKPASEATARKRPPKDKMANRRTAKKKSVKQFKSKPSSSK HHCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MILGSFMSFDSLALNPKTVSAIPSQFNKPTEIQQAVIPTIIAGKDVLALAQTGSGKTLAF CEECCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEE GLPLLNSIKHDVNELQAIIIVPTRELASQVAKALEPIATTLDIKTVTLTGGVDIEIQQQQ CCHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEEECHHH LLEKPQLVIATPGRLHAVIQENKLELTQCKSIILDEADRLLDMGFWPDVQTIISALPKKH HHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC QTLLFSATLPKELISQTEALLVNPVKVTTHQENSVVAAIEETLYLVNKGSKAQALIALLN CEEEEECCCCHHHHCCCHHHEECCEEEEECCCCCEEHHHHHHHHEECCCCHHHHHHHHHH QHAWSQVLVFIGAKDNADALTKRLSKAKISVNALHGNKNQEEREQALESFKNGKTRVLIA HHCCEEEEEEEECCCCHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE TDVMARGIHIDQLPVVINFDLPSHSATYVHRVGRTARAGSTGSAISLVSHSETDYLNAIR EHHHHCCCEEECCCEEEEECCCCCCHHHHHHHCCHHCCCCCCCEEEEEECCCHHHHHHHH TLTNKPLMLQALEGFPVTDKPASEATARKRPPKDKMANRRTAKKKSVKQFKSKPSSSK HHCCCCEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]