| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218709143
Identifier: 218709143
GI number: 218709143
Start: 1217912
End: 1218160
Strand: Reverse
Name: 218709143
Synonym: VS_1150
Alternate gene names: NA
Gene position: 1218160-1217912 (Counterclockwise)
Preceding gene: 218709144
Following gene: 218709142
Centisome position: 36.92
GC content: 39.76
Gene sequence:
>249_bases ATGACCTTACAAAGACATACATATTACGGCTTAATTCACCATGGAATTAAAACCCTATTAATGGACAGAATTGGCCACTT CACAGAGCGTGAATATCACGAATACCTTGACCTAACGACCGGCAAATCGACATGTTTTGCCATGAGTGAACAAGAGCTCG AGAATACCTTAGACAGTTTAAAGAGCGAAGGTTACCTTGAAGATATCAAGAAGCTAATACCTCGCTACCAAACCACATCA ATGCAATAA
Upstream 100 bases:
>100_bases AATGGATAAAATGGCATTCGAATTGCTTTGTCATAGATAACCCAACCAATATACAGCAGGTTGCACCAATAACATTGCAG CTTGTCACGGAGGATAGGCT
Downstream 100 bases:
>100_bases CGTTCTTAATCTCGATTGGGCGCTTCAATCCTTTATTGGGGTTAAACTCGCCAAAACGGTTAGATGTAATTAATTGGCAT CCAATTGTCTCGAGCTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTLQRHTYYGLIHHGIKTLLMDRIGHFTEREYHEYLDLTTGKSTCFAMSEQELENTLDSLKSEGYLEDIKKLIPRYQTTS MQ
Sequences:
>Translated_82_residues MTLQRHTYYGLIHHGIKTLLMDRIGHFTEREYHEYLDLTTGKSTCFAMSEQELENTLDSLKSEGYLEDIKKLIPRYQTTS MQ >Mature_81_residues TLQRHTYYGLIHHGIKTLLMDRIGHFTEREYHEYLDLTTGKSTCFAMSEQELENTLDSLKSEGYLEDIKKLIPRYQTTSM Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9701; Mature: 9570
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQRHTYYGLIHHGIKTLLMDRIGHFTEREYHEYLDLTTGKSTCFAMSEQELENTLDSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KSEGYLEDIKKLIPRYQTTSMQ HCCCHHHHHHHHHCCHHCCCCC >Mature Secondary Structure TLQRHTYYGLIHHGIKTLLMDRIGHFTEREYHEYLDLTTGKSTCFAMSEQELENTLDSL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KSEGYLEDIKKLIPRYQTTSMQ HCCCHHHHHHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA