Click here to switch to the map view.

The map label for this gene is yciI [H]

Identifier: 218709140

GI number: 218709140

Start: 1216030

End: 1216326

Strand: Reverse

Name: yciI [H]

Synonym: VS_1147

Alternate gene names: 218709140

Gene position: 1216326-1216030 (Counterclockwise)

Preceding gene: 218709141

Following gene: 218709139

Centisome position: 36.87

GC content: 44.44

Gene sequence:

>297_bases
ATGTGGTACGTGATTTTTTCTCAAGACGTCGAAAACTCATTAGAAAAACGCCTAAGTGTTCGCCCACAACATCTAGAACG
CCTACAAACACTTCACGATGAAGGCCGACTGTTAACAGCAGGTCCAATGCCAGCAATTGACTCCGATAACCCTGGCGAAG
CAGGCTTCACTGGTTCTACTGTTATTGCTGAATTCAACTCTTTGGAAGACGCACAAGCATGGGCTGATGCAGACCCGTAC
ATCGCTGCTGGTGTCTACCAGAATGTAATTGTTAAACCATTCAAGAAAGTATTTTAA

Upstream 100 bases:

>100_bases
CTTGTCATTAACTCTTCCAATACCGATTAGTTCGCGTAAATTAGCCAGATAACTAATTTAATCGCTCTAATTCAGTGAAG
TAACATAAGGATATCTCAAC

Downstream 100 bases:

>100_bases
CGTGAAAAAATGGATTATTGGGTCACTGGCTATTGCCCTACTCGCAGGCTGTAGCTCATCAAGTGAACAAGACAAACAAA
GACAGTTAGAGATGATGGCT

Product: YciI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MWYVIFSQDVENSLEKRLSVRPQHLERLQTLHDEGRLLTAGPMPAIDSDNPGEAGFTGSTVIAEFNSLEDAQAWADADPY
IAAGVYQNVIVKPFKKVF

Sequences:

>Translated_98_residues
MWYVIFSQDVENSLEKRLSVRPQHLERLQTLHDEGRLLTAGPMPAIDSDNPGEAGFTGSTVIAEFNSLEDAQAWADADPY
IAAGVYQNVIVKPFKKVF
>Mature_98_residues
MWYVIFSQDVENSLEKRLSVRPQHLERLQTLHDEGRLLTAGPMPAIDSDNPGEAGFTGSTVIAEFNSLEDAQAWADADPY
IAAGVYQNVIVKPFKKVF

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yciI family [H]

Homologues:

Organism=Escherichia coli, GI87081861, Length=98, Percent_Identity=80.6122448979592, Blast_Score=169, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR005545 [H]

Pfam domain/function: PF03795 YCII [H]

EC number: NA

Molecular weight: Translated: 10923; Mature: 10923

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYVIFSQDVENSLEKRLSVRPQHLERLQTLHDEGRLLTAGPMPAIDSDNPGEAGFTGST
CEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCH
VIAEFNSLEDAQAWADADPYIAAGVYQNVIVKPFKKVF
HHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWYVIFSQDVENSLEKRLSVRPQHLERLQTLHDEGRLLTAGPMPAIDSDNPGEAGFTGST
CEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCH
VIAEFNSLEDAQAWADADPYIAAGVYQNVIVKPFKKVF
HHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]