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The map label for this gene is ysgA [C]

Identifier: 218709127

GI number: 218709127

Start: 1201009

End: 1201746

Strand: Reverse

Name: ysgA [C]

Synonym: VS_1134

Alternate gene names: 218709127

Gene position: 1201746-1201009 (Counterclockwise)

Preceding gene: 218709128

Following gene: 218709122

Centisome position: 36.42

GC content: 45.8

Gene sequence:

>738_bases
ATGCGAACAATCACTACGCTCGGCCTGTTTTCAGTTTTACTGCCCTTCTCTGCGATTTCAGGAGAAAACATCACTTACCA
AGTCGATGGTATGGATTACGAAGGTTATTGGAGTGAAGCCAGTGACCAAGCGCCTTTGGTGCTGCTAATTCACGATTGGG
ATGGCTTAACTGATTACGAAAAGAAACGTTCTGAGATGCTCAACGAACTCGGTTACAACGTGTTCGCCATCGACCTATTT
GGTAAAGGCATTCGCCCTACCGAAGTGAAAGACAAAAAACAACACACAGGCGAGTTGTATAAAGATAGAGAAAAAATGCG
TGCACTATTTAATGCGGGAGCGATGGAAGCGAAAAGGCTTGGTGGTAACTTAGATAACAACGTGATAATGGGTTACTGTT
TTGGTGGCGCAGCCGTTTTAGAAGCCGCTCGTACTGGCATCCCATCGAAAGCTTATGTCACCTTCCATGGCGGTTTATCG
ACACCTAAAGGACAAGACTACTCTGAGACAAAAGCTCCAGTTGTCGTGTTCCATGGTACAGCAGACGCCATGATCTCAAT
GCACGACTTTGGAAGCCTCGCAGCTCAACTTGAATCAAGCAAGGTTCCGCATGAAATGATCACCTACAGTGGTGCGCCAC
ATGCCTTTACCGTATTCGGCTCAAACAACTATCAACAAGAAGCTGACCAGAAATCGTGGGATAGATTTACCCATGTACTA
GAAACAACCACCAGATAA

Upstream 100 bases:

>100_bases
CCAGTTTAGCTATTCAAGTTATAAACTGAAATCTGGCGAGAATCATCGCGTTATCTATACTTTCGATTGGAACATCAATT
GTCATCGAAAGGAATCACGC

Downstream 100 bases:

>100_bases
TCTTCTCCTTGAGAACCCATAACCCCATTCTACAGTTTAAGAATGGGGTGACTTTAGTTAACACGGTGTCATGCCGCTAC
AAATAACGATGGATACTTAA

Product: hypothetical protein

Products: oxohex-2-enedioate [C]

Alternate protein names: Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Dienelactone Hydrolase Family; Hydrolase; Dienelactone Hydrolases; Carboxymethylenebutenolidase (Dienelactone Hydrolase; Dienelactone Hydrolase Protein; Dienelactone Hydrolase-Related; Transposase Remnant

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRTITTLGLFSVLLPFSAISGENITYQVDGMDYEGYWSEASDQAPLVLLIHDWDGLTDYEKKRSEMLNELGYNVFAIDLF
GKGIRPTEVKDKKQHTGELYKDREKMRALFNAGAMEAKRLGGNLDNNVIMGYCFGGAAVLEAARTGIPSKAYVTFHGGLS
TPKGQDYSETKAPVVVFHGTADAMISMHDFGSLAAQLESSKVPHEMITYSGAPHAFTVFGSNNYQQEADQKSWDRFTHVL
ETTTR

Sequences:

>Translated_245_residues
MRTITTLGLFSVLLPFSAISGENITYQVDGMDYEGYWSEASDQAPLVLLIHDWDGLTDYEKKRSEMLNELGYNVFAIDLF
GKGIRPTEVKDKKQHTGELYKDREKMRALFNAGAMEAKRLGGNLDNNVIMGYCFGGAAVLEAARTGIPSKAYVTFHGGLS
TPKGQDYSETKAPVVVFHGTADAMISMHDFGSLAAQLESSKVPHEMITYSGAPHAFTVFGSNNYQQEADQKSWDRFTHVL
ETTTR
>Mature_245_residues
MRTITTLGLFSVLLPFSAISGENITYQVDGMDYEGYWSEASDQAPLVLLIHDWDGLTDYEKKRSEMLNELGYNVFAIDLF
GKGIRPTEVKDKKQHTGELYKDREKMRALFNAGAMEAKRLGGNLDNNVIMGYCFGGAAVLEAARTGIPSKAYVTFHGGLS
TPKGQDYSETKAPVVVFHGTADAMISMHDFGSLAAQLESSKVPHEMITYSGAPHAFTVFGSNNYQQEADQKSWDRFTHVL
ETTTR

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=221, Percent_Identity=29.8642533936652, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17536419, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193204305, Length=197, Percent_Identity=27.4111675126904, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17532653, Length=217, Percent_Identity=27.1889400921659, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.1.45 [C]

Molecular weight: Translated: 27141; Mature: 27141

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTITTLGLFSVLLPFSAISGENITYQVDGMDYEGYWSEASDQAPLVLLIHDWDGLTDYE
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHH
KKRSEMLNELGYNVFAIDLFGKGIRPTEVKDKKQHTGELYKDREKMRALFNAGAMEAKRL
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GGNLDNNVIMGYCFGGAAVLEAARTGIPSKAYVTFHGGLSTPKGQDYSETKAPVVVFHGT
CCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECC
ADAMISMHDFGSLAAQLESSKVPHEMITYSGAPHAFTVFGSNNYQQEADQKSWDRFTHVL
HHHEEEHHHHHHHHHHHHHCCCCHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
ETTTR
HHCCC
>Mature Secondary Structure
MRTITTLGLFSVLLPFSAISGENITYQVDGMDYEGYWSEASDQAPLVLLIHDWDGLTDYE
CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHH
KKRSEMLNELGYNVFAIDLFGKGIRPTEVKDKKQHTGELYKDREKMRALFNAGAMEAKRL
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GGNLDNNVIMGYCFGGAAVLEAARTGIPSKAYVTFHGGLSTPKGQDYSETKAPVVVFHGT
CCCCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECC
ADAMISMHDFGSLAAQLESSKVPHEMITYSGAPHAFTVFGSNNYQQEADQKSWDRFTHVL
HHHEEEHHHHHHHHHHHHHCCCCHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
ETTTR
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-carboxymethylenebut-2-en-4-olide; H2O [C]

Specific reaction: 4-carboxymethylenebut-2-en-4-olide + H2O = 4 oxohex-2-enedioate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA