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The map label for this gene is 218709035

Identifier: 218709035

GI number: 218709035

Start: 1086874

End: 1088358

Strand: Reverse

Name: 218709035

Synonym: VS_1041

Alternate gene names: NA

Gene position: 1088358-1086874 (Counterclockwise)

Preceding gene: 218709036

Following gene: 218709034

Centisome position: 32.99

GC content: 45.45

Gene sequence:

>1485_bases
ATGTTATGGCTTTATCTGCACTTTCCATCTCTGCAGTTGGATACCTTGTTTAATTCTGAGCTATCTAACTCCGAGAAAGT
TCACTCTAATGAAGAGTTACACGAGCAACCTATTATCATCGTGGATGAAAAAGATCACCGTGTGCTGCAAGCTAACCAAG
CTGCGCTGCAATCGGGAATTTCACTTGGTATGGGGCTAGGGTCTGCGGCGGCGCTGTGTCACAACTTACACGTCCACCCT
TACAGTATTGAGCTAGAAAAAAGTAAGCTCAAAGAGATCGCTCAATGGGCGTATTTGGTCACTTCTGACATGGCTTTACT
ACCACCGAATGGTTTGTTGATTAAAGCATCTAATATGCTGTCACTTTACGATGGGCTAGATAACTACTGGCATGAGCTCA
AAAGCCACTTAGAAACGCTCAATATCCAGTTCAGCTTCGCGACGGGTTACTCGCCACTTTCTGCGATCCTTTTGGGTAAG
CAATCCATCAACCAAGTCACTAATAATGTTGAGCAAATAAAAGCATGGGTCAATCAACAAGCATTAAGTTCCAGCGAGCT
GCCAACTAAGCAAGTGGAACGTCTGAACCGTGTCGGCATTAACTTAGTGGATGACCTATTGAAACTGCCTTTGCAAGAGG
TCGCACGTCGCTTTGATATCGATTTGGTGAATTATGTCGGTCGCCTTAACGGTCAGTTCAAGCACCCGATTGATTTCTAC
CATCCACCGGAGAATTTTCAGCAATATCTCGAGCTATTGTTTGATATTGAAAACATCCTGTTTATCGAAAAGCCGTTACT
GAAATTATTAAATCAACTCGAGTGTTTTTTGAAGCTACGCGACCGAGTTGCTTTCGAGTTAACGCTGACTTTGCATCTGA
GAGATAAAGACGACCACCCTGTCTCTTTCTATTCAGCACAAGGCGATTACCTTGCTGCAAAGTGGGCGAACCTGACTCAT
CTAACCTTAGAATCACTGAAGATAACAGCACCCGTACAGGGGCTGACCCTTTCCGTAATTCGTCATGGAGAACCGCAAAT
GGCCTACCGTGATCTTTTTGATGGCAATACAGGAACACTTGCCGCGTTAGATTTGCTCTCATTACTGCAAGCTAAGTTAG
GGCAAGCCTGCATTCAAACACCGAAAATACAGCACGACCCAAGGCCAGAAAAAGCCAATCAGTACTCGCTTCCAACACTG
AGTAAGTCTATGGCAAAGAGGCAAACACCCCCAGAGTTCGAGCAACAAACAGCGACTCTCAACATCAACCAACAGCGACT
CAGGCCCAGTATTTTATTGCCAGAGCCCGAAGCCCTAACCGAAAATGTCACCTTATCCCAAGGCCCTGAGCGCATTGTTT
CTGGCTGGTGGGATGGCGAGAAAATCATTCGTGACTACTTTATTGCTCACAGCGAAAACGGTCGGTGGCTATGGATCTTT
AGAACGCCAGATAAGCAGTGGTTTTTACACGGCTTATTTAGCTAG

Upstream 100 bases:

>100_bases
GCCGTTACTCACTGAAAAAATTATCCTTCAAGACAGTTCACATAGTGCTTTATCAAATAACACCGTGCTGGCTTTTCCTA
TTGCGAAACAAGGCTAGCGT

Downstream 100 bases:

>100_bases
CTTGTAGGAAAGTAAGTCAGTAAGAAAGTCAGTAAGAAACTTCGTTAGCTCGTCCGTTCCACGTACTCAATTTCAACATC
CCTTTTCAATCATGTTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MLWLYLHFPSLQLDTLFNSELSNSEKVHSNEELHEQPIIIVDEKDHRVLQANQAALQSGISLGMGLGSAAALCHNLHVHP
YSIELEKSKLKEIAQWAYLVTSDMALLPPNGLLIKASNMLSLYDGLDNYWHELKSHLETLNIQFSFATGYSPLSAILLGK
QSINQVTNNVEQIKAWVNQQALSSSELPTKQVERLNRVGINLVDDLLKLPLQEVARRFDIDLVNYVGRLNGQFKHPIDFY
HPPENFQQYLELLFDIENILFIEKPLLKLLNQLECFLKLRDRVAFELTLTLHLRDKDDHPVSFYSAQGDYLAAKWANLTH
LTLESLKITAPVQGLTLSVIRHGEPQMAYRDLFDGNTGTLAALDLLSLLQAKLGQACIQTPKIQHDPRPEKANQYSLPTL
SKSMAKRQTPPEFEQQTATLNINQQRLRPSILLPEPEALTENVTLSQGPERIVSGWWDGEKIIRDYFIAHSENGRWLWIF
RTPDKQWFLHGLFS

Sequences:

>Translated_494_residues
MLWLYLHFPSLQLDTLFNSELSNSEKVHSNEELHEQPIIIVDEKDHRVLQANQAALQSGISLGMGLGSAAALCHNLHVHP
YSIELEKSKLKEIAQWAYLVTSDMALLPPNGLLIKASNMLSLYDGLDNYWHELKSHLETLNIQFSFATGYSPLSAILLGK
QSINQVTNNVEQIKAWVNQQALSSSELPTKQVERLNRVGINLVDDLLKLPLQEVARRFDIDLVNYVGRLNGQFKHPIDFY
HPPENFQQYLELLFDIENILFIEKPLLKLLNQLECFLKLRDRVAFELTLTLHLRDKDDHPVSFYSAQGDYLAAKWANLTH
LTLESLKITAPVQGLTLSVIRHGEPQMAYRDLFDGNTGTLAALDLLSLLQAKLGQACIQTPKIQHDPRPEKANQYSLPTL
SKSMAKRQTPPEFEQQTATLNINQQRLRPSILLPEPEALTENVTLSQGPERIVSGWWDGEKIIRDYFIAHSENGRWLWIF
RTPDKQWFLHGLFS
>Mature_494_residues
MLWLYLHFPSLQLDTLFNSELSNSEKVHSNEELHEQPIIIVDEKDHRVLQANQAALQSGISLGMGLGSAAALCHNLHVHP
YSIELEKSKLKEIAQWAYLVTSDMALLPPNGLLIKASNMLSLYDGLDNYWHELKSHLETLNIQFSFATGYSPLSAILLGK
QSINQVTNNVEQIKAWVNQQALSSSELPTKQVERLNRVGINLVDDLLKLPLQEVARRFDIDLVNYVGRLNGQFKHPIDFY
HPPENFQQYLELLFDIENILFIEKPLLKLLNQLECFLKLRDRVAFELTLTLHLRDKDDHPVSFYSAQGDYLAAKWANLTH
LTLESLKITAPVQGLTLSVIRHGEPQMAYRDLFDGNTGTLAALDLLSLLQAKLGQACIQTPKIQHDPRPEKANQYSLPTL
SKSMAKRQTPPEFEQQTATLNINQQRLRPSILLPEPEALTENVTLSQGPERIVSGWWDGEKIIRDYFIAHSENGRWLWIF
RTPDKQWFLHGLFS

Specific function: Unknown

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56387; Mature: 56387

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWLYLHFPSLQLDTLFNSELSNSEKVHSNEELHEQPIIIVDEKDHRVLQANQAALQSGI
CEEEEEECCCEEEHHHHCCCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHCCH
SLGMGLGSAAALCHNLHVHPYSIELEKSKLKEIAQWAYLVTSDMALLPPNGLLIKASNML
HHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCHH
SLYDGLDNYWHELKSHLETLNIQFSFATGYSPLSAILLGKQSINQVTNNVEQIKAWVNQQ
HHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ALSSSELPTKQVERLNRVGINLVDDLLKLPLQEVARRFDIDLVNYVGRLNGQFKHPIDFY
HCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC
HPPENFQQYLELLFDIENILFIEKPLLKLLNQLECFLKLRDRVAFELTLTLHLRDKDDHP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCC
VSFYSAQGDYLAAKWANLTHLTLESLKITAPVQGLTLSVIRHGEPQMAYRDLFDGNTGTL
EEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCHH
AALDLLSLLQAKLGQACIQTPKIQHDPRPEKANQYSLPTLSKSMAKRQTPPEFEQQTATL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCEEEE
NINQQRLRPSILLPEPEALTENVTLSQGPERIVSGWWDGEKIIRDYFIAHSENGRWLWIF
ECCHHHCCCCEECCCCHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHEECCCCCEEEEE
RTPDKQWFLHGLFS
ECCCHHHHHHCCCC
>Mature Secondary Structure
MLWLYLHFPSLQLDTLFNSELSNSEKVHSNEELHEQPIIIVDEKDHRVLQANQAALQSGI
CEEEEEECCCEEEHHHHCCCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHCCH
SLGMGLGSAAALCHNLHVHPYSIELEKSKLKEIAQWAYLVTSDMALLPPNGLLIKASNML
HHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCHH
SLYDGLDNYWHELKSHLETLNIQFSFATGYSPLSAILLGKQSINQVTNNVEQIKAWVNQQ
HHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
ALSSSELPTKQVERLNRVGINLVDDLLKLPLQEVARRFDIDLVNYVGRLNGQFKHPIDFY
HCCCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCC
HPPENFQQYLELLFDIENILFIEKPLLKLLNQLECFLKLRDRVAFELTLTLHLRDKDDHP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCC
VSFYSAQGDYLAAKWANLTHLTLESLKITAPVQGLTLSVIRHGEPQMAYRDLFDGNTGTL
EEEEECCCCEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCHH
AALDLLSLLQAKLGQACIQTPKIQHDPRPEKANQYSLPTLSKSMAKRQTPPEFEQQTATL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCEEEE
NINQQRLRPSILLPEPEALTENVTLSQGPERIVSGWWDGEKIIRDYFIAHSENGRWLWIF
ECCHHHCCCCEECCCCHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHEECCCCCEEEEE
RTPDKQWFLHGLFS
ECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA