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The map label for this gene is 218708965

Identifier: 218708965

GI number: 218708965

Start: 1003450

End: 1003884

Strand: Reverse

Name: 218708965

Synonym: VS_0969

Alternate gene names: NA

Gene position: 1003884-1003450 (Counterclockwise)

Preceding gene: 218708966

Following gene: 218708963

Centisome position: 30.43

GC content: 43.68

Gene sequence:

>435_bases
ATGATTAGCGAATGGGAAAAACACACGTTACTTGCCGATACGGCATTGCAGCTCGACGATCCTGTACAAAGTATTCTTCA
CTATCAGCAAGCATTGAGTTTAAGCGAAAAAATTACTGAACGTACCGATATCCAAGCGGACGAGCGCTTACTTATCTCTG
TGATTTCTTGTCACAACCTTGCTCAGTTTTGGCGATGGGCCGGCGATACTGAATATGAACTCAAGTATCTCCAATTGGCT
TCAGAAAAAGTACTGACACTGATCCCGCAATGTCCCAATACGCAATGTTCAAGCTTCATTGACTCAATTGGTTGCTGTAA
GAAAGCCCTTATCGATTTCATGAAACGCCATCCCAACCCTAAAATTGCTTCTATGGTGGAAAAGATCGATACCGCGACCA
ACTGTGAAATGATCGCACGCTTCCGCTTGAACTAA

Upstream 100 bases:

>100_bases
ATATTCTTTACTAATTATTACAACATTCTCACTGATGAAACTTTACATGATAATAATTATCATTTAAATTAAGTCCCCTA
TTGATTAGTGAGGTAACACA

Downstream 100 bases:

>100_bases
ACAAATTACGTTTAAACAACGACTCAAATTTAAAATATAAAAAAGCCCGTCATCAGTGAAAACGGGCTTTGTCATTTCAA
AACGAGCTATTATTCAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MISEWEKHTLLADTALQLDDPVQSILHYQQALSLSEKITERTDIQADERLLISVISCHNLAQFWRWAGDTEYELKYLQLA
SEKVLTLIPQCPNTQCSSFIDSIGCCKKALIDFMKRHPNPKIASMVEKIDTATNCEMIARFRLN

Sequences:

>Translated_144_residues
MISEWEKHTLLADTALQLDDPVQSILHYQQALSLSEKITERTDIQADERLLISVISCHNLAQFWRWAGDTEYELKYLQLA
SEKVLTLIPQCPNTQCSSFIDSIGCCKKALIDFMKRHPNPKIASMVEKIDTATNCEMIARFRLN
>Mature_144_residues
MISEWEKHTLLADTALQLDDPVQSILHYQQALSLSEKITERTDIQADERLLISVISCHNLAQFWRWAGDTEYELKYLQLA
SEKVLTLIPQCPNTQCSSFIDSIGCCKKALIDFMKRHPNPKIASMVEKIDTATNCEMIARFRLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020206
- ProDom:   PD087558 [H]

Pfam domain/function: PF10952 DUF2753 [H]

EC number: NA

Molecular weight: Translated: 16529; Mature: 16529

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISEWEKHTLLADTALQLDDPVQSILHYQQALSLSEKITERTDIQADERLLISVISCHNL
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AQFWRWAGDTEYELKYLQLASEKVLTLIPQCPNTQCSSFIDSIGCCKKALIDFMKRHPNP
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
KIASMVEKIDTATNCEMIARFRLN
HHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MISEWEKHTLLADTALQLDDPVQSILHYQQALSLSEKITERTDIQADERLLISVISCHNL
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AQFWRWAGDTEYELKYLQLASEKVLTLIPQCPNTQCSSFIDSIGCCKKALIDFMKRHPNP
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
KIASMVEKIDTATNCEMIARFRLN
HHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8021208; 12620739 [H]