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The map label for this gene is 218708962

Identifier: 218708962

GI number: 218708962

Start: 1000246

End: 1001571

Strand: Reverse

Name: 218708962

Synonym: VS_0966

Alternate gene names: NA

Gene position: 1001571-1000246 (Counterclockwise)

Preceding gene: 218708963

Following gene: 218708961

Centisome position: 30.36

GC content: 46.53

Gene sequence:

>1326_bases
ATGAATCCTGTTGTAATTTCAGTTTGCATCATGCTTGTTTTAGCTTTGATGCGCGTAAACGTTGTCGTGGCTCTCACGTT
CAGCGCAATTATCGGTGGCGTAGCCTCTGGTATGAGTGTGAACGATGCTGTAGCAGCGTTCGAAAGTGGATTAGGTGGCG
GTGCAACTATCGCACTTAGCTACGCAATGCTTGGTACCTTTGCTGTTGCTATCTCTCGTTCTGGTATCACAGATCTACTT
GCTCAAAGCGTCATTAAGCGCATTCACGGCAAAGAGAACAGTGCGGCATCTAATGGTCTAAAATATGGCATCCTTGCGTC
TTTGATCTTAGTGACCATGTCTTCGCAAAACGTGATTCCTGTGCATATCGCCTTCATCCCAATTTTAATCCCACCTCTAT
TAGGCGTATTCGCAAAAATGAACCTAGACCGTCGTCTGGTTGCGTGTGTACTTACTTTTGGCCTGATTACTCCGTATATG
GTTCTACCTATCGGTTTTGGTGGCATCTTCCTAAACAACATCCTGCTTAAAAACCTTCACGACAACGGTCTTGAAAACGT
AGTAGCAAGCCAAGTACCAATGGCGATGTTGTTACCGGCTGCAGGCATGATCTTTGGTCTTCTTACGGCAGTATTCTTTA
CTTACCGTAAGCCTCGCCAATACAAAGAAACGTCTCATACTGTTGTTTCAACCGAAGTGAAAGAGATCAACAAGAAGCAC
ATCCTAGTGGCTGCTGCGGGTATTGTTGCTGCACTAACGGTTCAACTATCGACAGGTTCTATGATCATCGGTGCTTTGGC
TGGTTTCATGGTATTCACCTTCGGTGGTGTAATCGCTTGGAAAGAGACACACGATGTCTTCACTAAGGGCGTTCACATGA
TGGCAATGATCGGTTTCATCATGATTGCAGCGGCAGGTTTTGCAGCGGTAATGAAGCAAACTGGTGGCGTTGAATCTTTG
GTTGAAGCGCTTTCAACCAGCATCGGTGACAACAAGCCTCTAGCGGCACTGCTTATGCTAATTGTTGGTCTATTGGTAAC
TATGGGTATTGGTTCTTCGTTCTCTACGATTCCAATCCTTGCAACTATCTACGTTCCACTAGCAGCAGCATTTGGTTTCT
CACCTATGGCAACGATCGCTCTAGTAGGTACAGCGGCAGCGCTTGGTGATGCTGGCTCTCCAGCTTCTGACTCAACCTTA
GGTCCAACATCGGGTCTTAATGCTGATGGTCAACACGAGCACGTATGGGAAACCGTAGTACCGACGTTCCTACACTACAA
CATCCCACTGATCGTATTCGGTTGGATTGCAGCCATGGTTCTGTAA

Upstream 100 bases:

>100_bases
CCCTTGGTGGTTGGCCTCTTGTTGACGAAGAATAACAAATAGAGTCGGTAAACGTTCACTCGTATTGCCTTCATAAAAAA
CACAACATCCCGAGAATAAT

Downstream 100 bases:

>100_bases
TTAGGTTCTGTAGTTAAAGAGTCCTACGCTAACTTTTATAAAGACCGCCTCGTGCGGTCTTTTTTGTATATAGTATCTTT
CCCCTCTTAATTCCTTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MNPVVISVCIMLVLALMRVNVVVALTFSAIIGGVASGMSVNDAVAAFESGLGGGATIALSYAMLGTFAVAISRSGITDLL
AQSVIKRIHGKENSAASNGLKYGILASLILVTMSSQNVIPVHIAFIPILIPPLLGVFAKMNLDRRLVACVLTFGLITPYM
VLPIGFGGIFLNNILLKNLHDNGLENVVASQVPMAMLLPAAGMIFGLLTAVFFTYRKPRQYKETSHTVVSTEVKEINKKH
ILVAAAGIVAALTVQLSTGSMIIGALAGFMVFTFGGVIAWKETHDVFTKGVHMMAMIGFIMIAAAGFAAVMKQTGGVESL
VEALSTSIGDNKPLAALLMLIVGLLVTMGIGSSFSTIPILATIYVPLAAAFGFSPMATIALVGTAAALGDAGSPASDSTL
GPTSGLNADGQHEHVWETVVPTFLHYNIPLIVFGWIAAMVL

Sequences:

>Translated_441_residues
MNPVVISVCIMLVLALMRVNVVVALTFSAIIGGVASGMSVNDAVAAFESGLGGGATIALSYAMLGTFAVAISRSGITDLL
AQSVIKRIHGKENSAASNGLKYGILASLILVTMSSQNVIPVHIAFIPILIPPLLGVFAKMNLDRRLVACVLTFGLITPYM
VLPIGFGGIFLNNILLKNLHDNGLENVVASQVPMAMLLPAAGMIFGLLTAVFFTYRKPRQYKETSHTVVSTEVKEINKKH
ILVAAAGIVAALTVQLSTGSMIIGALAGFMVFTFGGVIAWKETHDVFTKGVHMMAMIGFIMIAAAGFAAVMKQTGGVESL
VEALSTSIGDNKPLAALLMLIVGLLVTMGIGSSFSTIPILATIYVPLAAAFGFSPMATIALVGTAAALGDAGSPASDSTL
GPTSGLNADGQHEHVWETVVPTFLHYNIPLIVFGWIAAMVL
>Mature_441_residues
MNPVVISVCIMLVLALMRVNVVVALTFSAIIGGVASGMSVNDAVAAFESGLGGGATIALSYAMLGTFAVAISRSGITDLL
AQSVIKRIHGKENSAASNGLKYGILASLILVTMSSQNVIPVHIAFIPILIPPLLGVFAKMNLDRRLVACVLTFGLITPYM
VLPIGFGGIFLNNILLKNLHDNGLENVVASQVPMAMLLPAAGMIFGLLTAVFFTYRKPRQYKETSHTVVSTEVKEINKKH
ILVAAAGIVAALTVQLSTGSMIIGALAGFMVFTFGGVIAWKETHDVFTKGVHMMAMIGFIMIAAAGFAAVMKQTGGVESL
VEALSTSIGDNKPLAALLMLIVGLLVTMGIGSSFSTIPILATIYVPLAAAFGFSPMATIALVGTAAALGDAGSPASDSTL
GPTSGLNADGQHEHVWETVVPTFLHYNIPLIVFGWIAAMVL

Specific function: Unknown

COG id: COG2056

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991
- InterPro:   IPR018461 [H]

Pfam domain/function: PF03553 Na_H_antiporter [H]

EC number: NA

Molecular weight: Translated: 45899; Mature: 45899

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVVISVCIMLVLALMRVNVVVALTFSAIIGGVASGMSVNDAVAAFESGLGGGATIALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH
YAMLGTFAVAISRSGITDLLAQSVIKRIHGKENSAASNGLKYGILASLILVTMSSQNVIP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEE
VHIAFIPILIPPLLGVFAKMNLDRRLVACVLTFGLITPYMVLPIGFGGIFLNNILLKNLH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
DNGLENVVASQVPMAMLLPAAGMIFGLLTAVFFTYRKPRQYKETSHTVVSTEVKEINKKH
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCHHH
ILVAAAGIVAALTVQLSTGSMIIGALAGFMVFTFGGVIAWKETHDVFTKGVHMMAMIGFI
EEEEHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHH
MIAAAGFAAVMKQTGGVESLVEALSTSIGDNKPLAALLMLIVGLLVTMGIGSSFSTIPIL
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
ATIYVPLAAAFGFSPMATIALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHVWETVV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
PTFLHYNIPLIVFGWIAAMVL
HHHHHCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MNPVVISVCIMLVLALMRVNVVVALTFSAIIGGVASGMSVNDAVAAFESGLGGGATIALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHH
YAMLGTFAVAISRSGITDLLAQSVIKRIHGKENSAASNGLKYGILASLILVTMSSQNVIP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEE
VHIAFIPILIPPLLGVFAKMNLDRRLVACVLTFGLITPYMVLPIGFGGIFLNNILLKNLH
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHC
DNGLENVVASQVPMAMLLPAAGMIFGLLTAVFFTYRKPRQYKETSHTVVSTEVKEINKKH
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHCHHH
ILVAAAGIVAALTVQLSTGSMIIGALAGFMVFTFGGVIAWKETHDVFTKGVHMMAMIGFI
EEEEHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHH
MIAAAGFAAVMKQTGGVESLVEALSTSIGDNKPLAALLMLIVGLLVTMGIGSSFSTIPIL
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
ATIYVPLAAAFGFSPMATIALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHVWETVV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
PTFLHYNIPLIVFGWIAAMVL
HHHHHCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739; 8021208 [H]