Click here to switch to the map view.

The map label for this gene is 218708949

Identifier: 218708949

GI number: 218708949

Start: 980905

End: 982083

Strand: Direct

Name: 218708949

Synonym: VS_0953

Alternate gene names: NA

Gene position: 980905-982083 (Clockwise)

Preceding gene: 218708948

Following gene: 218708951

Centisome position: 29.73

GC content: 45.63

Gene sequence:

>1179_bases
ATGTCACGAGTTTCGAGTCGAAATTGGATAGTGTTGGTGCTTAGCATTGTGCTAAGTGGTTGTTCTCTCTTGGAAGTTAA
GCTAGATAGTCAAACGACGCCTCTTACTCAGCAAGAGTTACAGGCTCGGATCATGACGCGTGAATACGCCAAGATGTTTT
TTACACGAGTAGAAGACTCGGCCGATCTCATTGCGCAATCTTACCCTGCTGATGACACCTTACATCAATCTTATGTGTTG
CTTTGGAAGATCCATGCTGAGCAGGGCTTACAACAAGCGGCGTACCAAACTTCCCCAATGTCAGCATTAATTGACTCATG
GGTTTTCACAGCCCAAATGAATCAGTTTTATAGCCAAGGCGATGGCGCGGATCTGTTCGTGACGGATAATGCGGTAGAGA
CGGCTCGTTCTCTTGACCAAGAAGCAGAGAAACTGGCAAAGGGTGTATTGAGCTCGAGTGATTTCAAGAGCAGCAAAGCA
TTCGTCGCAGAGTTCGCCGCGAGCAATCCTTTTAGAGATCTTACCTTCAGAAGTACGCCTGCTTATCGCGAATGGCTGCC
TCATCTGGGTAAAGACGAATCTCAAATCGTTCAGAGCCTAGGTACTATGCCAGAAGCCATGAGCGATGCATCAGACCGCT
TAAGCCTAATGGCTGATCAAACGCCAAAATTGATGACGTGGAAGGCCGAGTTGGTTGCGATGAACAGTTCGCTCACAGGT
GAAGATTTGTCGATGACATTGGAAAGCCTTCGTCAAACATCAGCAAGCATGCAAGACTTCATTGAGAACAACCCTGAATA
CATGCAAACACTGGCTTCTATTATGTCGACAGAAATGCAGCCTTTACTCAACGACCTAAGTGATAAGACAGATCAAAAAT
TGGCGATGCTCACTGAAGAACGTGTAGCGTTAGAAAAAATGGTGACACGAGAGAGAGAAGCTCTGGTCGCGATGATTGCG
AAAGAGCGTATTGAAATTGCAGGCATTGTGACTTCTGAAAGGGAACTGTTTACACAAGATCTTGATCGTGTCTCTCAAGA
GGTGGTGGTACTCGCGATTGATAAACTGATGGACTTAATCAAAGGTGTGATTATCTACTTCATCCTGTTTATCTTGGTGG
TGTTCTTTGCACCGTTAGGCATCGGTTATTGGTTGGGTAAACGAACCGCTAGCAAATAA

Upstream 100 bases:

>100_bases
GACTATTTAAATACCCAACGTTAACTTTTACAGGTTTTTTGACAATACTCTGACGAAGCGCTCCTACAATCCGCGCCCTT
AGTCTTTGTTAGAGGTTTAT

Downstream 100 bases:

>100_bases
ATTCAGTAATTAAGTAGATCAAAAAAGAGCGCTCTAGAGCGCTCTTTTGGCATTTATATCATCAACATTTTTGTGCTTAC
GCACTAAAGCATTAAAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MSRVSSRNWIVLVLSIVLSGCSLLEVKLDSQTTPLTQQELQARIMTREYAKMFFTRVEDSADLIAQSYPADDTLHQSYVL
LWKIHAEQGLQQAAYQTSPMSALIDSWVFTAQMNQFYSQGDGADLFVTDNAVETARSLDQEAEKLAKGVLSSSDFKSSKA
FVAEFAASNPFRDLTFRSTPAYREWLPHLGKDESQIVQSLGTMPEAMSDASDRLSLMADQTPKLMTWKAELVAMNSSLTG
EDLSMTLESLRQTSASMQDFIENNPEYMQTLASIMSTEMQPLLNDLSDKTDQKLAMLTEERVALEKMVTREREALVAMIA
KERIEIAGIVTSERELFTQDLDRVSQEVVVLAIDKLMDLIKGVIIYFILFILVVFFAPLGIGYWLGKRTASK

Sequences:

>Translated_392_residues
MSRVSSRNWIVLVLSIVLSGCSLLEVKLDSQTTPLTQQELQARIMTREYAKMFFTRVEDSADLIAQSYPADDTLHQSYVL
LWKIHAEQGLQQAAYQTSPMSALIDSWVFTAQMNQFYSQGDGADLFVTDNAVETARSLDQEAEKLAKGVLSSSDFKSSKA
FVAEFAASNPFRDLTFRSTPAYREWLPHLGKDESQIVQSLGTMPEAMSDASDRLSLMADQTPKLMTWKAELVAMNSSLTG
EDLSMTLESLRQTSASMQDFIENNPEYMQTLASIMSTEMQPLLNDLSDKTDQKLAMLTEERVALEKMVTREREALVAMIA
KERIEIAGIVTSERELFTQDLDRVSQEVVVLAIDKLMDLIKGVIIYFILFILVVFFAPLGIGYWLGKRTASK
>Mature_391_residues
SRVSSRNWIVLVLSIVLSGCSLLEVKLDSQTTPLTQQELQARIMTREYAKMFFTRVEDSADLIAQSYPADDTLHQSYVLL
WKIHAEQGLQQAAYQTSPMSALIDSWVFTAQMNQFYSQGDGADLFVTDNAVETARSLDQEAEKLAKGVLSSSDFKSSKAF
VAEFAASNPFRDLTFRSTPAYREWLPHLGKDESQIVQSLGTMPEAMSDASDRLSLMADQTPKLMTWKAELVAMNSSLTGE
DLSMTLESLRQTSASMQDFIENNPEYMQTLASIMSTEMQPLLNDLSDKTDQKLAMLTEERVALEKMVTREREALVAMIAK
ERIEIAGIVTSERELFTQDLDRVSQEVVVLAIDKLMDLIKGVIIYFILFILVVFFAPLGIGYWLGKRTASK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44019; Mature: 43888

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVSSRNWIVLVLSIVLSGCSLLEVKLDSQTTPLTQQELQARIMTREYAKMFFTRVEDS
CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
ADLIAQSYPADDTLHQSYVLLWKIHAEQGLQQAAYQTSPMSALIDSWVFTAQMNQFYSQG
HHHHHHCCCCCCHHHHHHHHEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DGADLFVTDNAVETARSLDQEAEKLAKGVLSSSDFKSSKAFVAEFAASNPFRDLTFRSTP
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
AYREWLPHLGKDESQIVQSLGTMPEAMSDASDRLSLMADQTPKLMTWKAELVAMNSSLTG
CHHHHHHCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCEEHHHHHHEECCCCCC
EDLSMTLESLRQTSASMQDFIENNPEYMQTLASIMSTEMQPLLNDLSDKTDQKLAMLTEE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RVALEKMVTREREALVAMIAKERIEIAGIVTSERELFTQDLDRVSQEVVVLAIDKLMDLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVIIYFILFILVVFFAPLGIGYWLGKRTASK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRVSSRNWIVLVLSIVLSGCSLLEVKLDSQTTPLTQQELQARIMTREYAKMFFTRVEDS
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
ADLIAQSYPADDTLHQSYVLLWKIHAEQGLQQAAYQTSPMSALIDSWVFTAQMNQFYSQG
HHHHHHCCCCCCHHHHHHHHEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
DGADLFVTDNAVETARSLDQEAEKLAKGVLSSSDFKSSKAFVAEFAASNPFRDLTFRSTP
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
AYREWLPHLGKDESQIVQSLGTMPEAMSDASDRLSLMADQTPKLMTWKAELVAMNSSLTG
CHHHHHHCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCEEHHHHHHEECCCCCC
EDLSMTLESLRQTSASMQDFIENNPEYMQTLASIMSTEMQPLLNDLSDKTDQKLAMLTEE
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RVALEKMVTREREALVAMIAKERIEIAGIVTSERELFTQDLDRVSQEVVVLAIDKLMDLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGVIIYFILFILVVFFAPLGIGYWLGKRTASK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA