| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708898
Identifier: 218708898
GI number: 218708898
Start: 923691
End: 923936
Strand: Direct
Name: 218708898
Synonym: VS_0899
Alternate gene names: NA
Gene position: 923691-923936 (Clockwise)
Preceding gene: 218708897
Following gene: 218708899
Centisome position: 28.0
GC content: 39.02
Gene sequence:
>246_bases ATGGGTGACGTGAGTGCTGATTCAACACGCACAGGTCGCTCATTAACCCTGACCAACAGAACAAAGCTTTTTAAACATAG ATTTTCAAACGTGTTTTTAAACCTTAGCTTTATAAGCTTCGCTTTAGAAAATAGTTTTTTAAATTTGAGTTTAGAAATTG AAAGGTTTCCAGAGCTTGATCAGTACTGGCTTTGGTTAGTACTGGTTGAACAGACGCAAGACTCTGTCTCCTGGAGAGCG AGATAG
Upstream 100 bases:
>100_bases CTAACAGCTTTGGTTTCGGCGGTACGAACGCAACGCTAGTAATCAAAAAATACCAAGGCTAATTGAAGCTAAGGTTAAAT TAATAAAAGGTTAATCGTTA
Downstream 100 bases:
>100_bases GATCCTTTTGTTCTGGATGTTTGCCCGATTGTTTATTCAATCGGGCATTTTTCGTTTTAGTCTTCTGACTTTAGTTTTCT AATTTCAGGTAGTTGTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MGDVSADSTRTGRSLTLTNRTKLFKHRFSNVFLNLSFISFALENSFLNLSLEIERFPELDQYWLWLVLVEQTQDSVSWRA R
Sequences:
>Translated_81_residues MGDVSADSTRTGRSLTLTNRTKLFKHRFSNVFLNLSFISFALENSFLNLSLEIERFPELDQYWLWLVLVEQTQDSVSWRA R >Mature_80_residues GDVSADSTRTGRSLTLTNRTKLFKHRFSNVFLNLSFISFALENSFLNLSLEIERFPELDQYWLWLVLVEQTQDSVSWRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9544; Mature: 9413
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVSADSTRTGRSLTLTNRTKLFKHRFSNVFLNLSFISFALENSFLNLSLEIERFPELD CCCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEHHHHHEECCCCEEEEEEEECCCCCCC QYWLWLVLVEQTQDSVSWRAR HHEEEEEEEECCCCCCCCCCC >Mature Secondary Structure GDVSADSTRTGRSLTLTNRTKLFKHRFSNVFLNLSFISFALENSFLNLSLEIERFPELD CCCCCCCCCCCCEEEECHHHHHHHHHHHHHEEEHHHHHEECCCCEEEEEEEECCCCCCC QYWLWLVLVEQTQDSVSWRAR HHEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA