| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708787
Identifier: 218708787
GI number: 218708787
Start: 808458
End: 809228
Strand: Reverse
Name: 218708787
Synonym: VS_0786
Alternate gene names: NA
Gene position: 809228-808458 (Counterclockwise)
Preceding gene: 218708788
Following gene: 218708786
Centisome position: 24.53
GC content: 44.1
Gene sequence:
>771_bases ATGAGCAAAGTAGGCCAATGTTGGCGAGTATTCGCGACGGGGCTCTGCTTTACCATCTTTGGTTTGGGAGGCTTAGTCTT AAGCTTCTTAATCTTACCTTCGATCGCCCTAACGACTCGCAACGTCATAGAAAGAGAGCTCAAAGCACAACGATTAATCC GTTTCTCATTCAATGCATTCTGCCAAATAATGAAGTTCACAGGCGCGATTGATTACCAAATTGATGGCGCCGAACTGCTC CGCGAAGATCGCAACTGCATCATTGTCGCCAATCACCCTAGCTTGATTGACTATGTACTGATCGCCTCTCAACTTCCTCA ATGTGATTGTCTTGTTAAAGCGGCAATATGGGAAAACCCGTTTATGAAGAGGATTGTCAAAGCAGCGGGATACATACCCA ACCAAACCCCTGACGATCTTTTAGAACGCTGTGAAGAACGCTTTTCGCGTGGAAATGTATTGTTAGTTTTCCCTGAAGGA ACTCGCACAACGCCAGGAATTGAACCATCCTTACAACGTGGTGCGGCACAAATTGCCACTCGAACACAAACCGACTTACG CGTGATTCATATTACAGTTTCTCCGACATTCTTAACAAAAGAGAAAAAATGGTATCAAGTTCCTGCCACTAAACCCTTTT TTCATATCGCAGTGAAAGGTAAAATAGACGTCGCACCCTTTATTGAGAATTCAAACAACTTAACTTCGGCAGCAAGGCGC CTCAATCAACACCTTGCACAGACTATTTTTCCTTCCGAAGAGAATATTTAG
Upstream 100 bases:
>100_bases AAACGCTACAACATATCCTATTGGGAACACAGCATTGGACTATTGCTGGTAAGCACCAAAACTGGTCCTGGGTCAATAAC GCCCAAGCAGGTGCACAGAA
Downstream 100 bases:
>100_bases CTCATCAATAAAACAACTGGTGATATCAGCGTTTCGAAAATACATCACATAATGTAGAATCGCCCCCCTTGAAGTAGCAT TTAGATAAAGTATTAAGTAG
Product: putative phospholipid biosynthesis acyltransferase
Products: NA
Alternate protein names: Acyltransferase; Acyltransferase Family Protein; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Phospholipid Biosynthesis Acyltransferase; Transmembrane Acyltransferase; 1-Acylglycerol-3-Phosphate O-Acyltransferase; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferases; Putative Phospholipid Biosynthesis Acyltransferase; 1-Acyl-Sn-Glycerol-3-Phosphate O-Acyltransferase; Acyltransferase Family
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSKVGQCWRVFATGLCFTIFGLGGLVLSFLILPSIALTTRNVIERELKAQRLIRFSFNAFCQIMKFTGAIDYQIDGAELL REDRNCIIVANHPSLIDYVLIASQLPQCDCLVKAAIWENPFMKRIVKAAGYIPNQTPDDLLERCEERFSRGNVLLVFPEG TRTTPGIEPSLQRGAAQIATRTQTDLRVIHITVSPTFLTKEKKWYQVPATKPFFHIAVKGKIDVAPFIENSNNLTSAARR LNQHLAQTIFPSEENI
Sequences:
>Translated_256_residues MSKVGQCWRVFATGLCFTIFGLGGLVLSFLILPSIALTTRNVIERELKAQRLIRFSFNAFCQIMKFTGAIDYQIDGAELL REDRNCIIVANHPSLIDYVLIASQLPQCDCLVKAAIWENPFMKRIVKAAGYIPNQTPDDLLERCEERFSRGNVLLVFPEG TRTTPGIEPSLQRGAAQIATRTQTDLRVIHITVSPTFLTKEKKWYQVPATKPFFHIAVKGKIDVAPFIENSNNLTSAARR LNQHLAQTIFPSEENI >Mature_255_residues SKVGQCWRVFATGLCFTIFGLGGLVLSFLILPSIALTTRNVIERELKAQRLIRFSFNAFCQIMKFTGAIDYQIDGAELLR EDRNCIIVANHPSLIDYVLIASQLPQCDCLVKAAIWENPFMKRIVKAAGYIPNQTPDDLLERCEERFSRGNVLLVFPEGT RTTPGIEPSLQRGAAQIATRTQTDLRVIHITVSPTFLTKEKKWYQVPATKPFFHIAVKGKIDVAPFIENSNNLTSAARRL NQHLAQTIFPSEENI
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28811; Mature: 28680
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVGQCWRVFATGLCFTIFGLGGLVLSFLILPSIALTTRNVIERELKAQRLIRFSFNAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CQIMKFTGAIDYQIDGAELLREDRNCIIVANHPSLIDYVLIASQLPQCDCLVKAAIWENP HHHHHHCCCEEEEECHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCH FMKRIVKAAGYIPNQTPDDLLERCEERFSRGNVLLVFPEGTRTTPGIEPSLQRGAAQIAT HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH RTQTDLRVIHITVSPTFLTKEKKWYQVPATKPFFHIAVKGKIDVAPFIENSNNLTSAARR CCCCCEEEEEEEECCEEEECCCCEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHH LNQHLAQTIFPSEENI HHHHHHHHHCCCCCCC >Mature Secondary Structure SKVGQCWRVFATGLCFTIFGLGGLVLSFLILPSIALTTRNVIERELKAQRLIRFSFNAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CQIMKFTGAIDYQIDGAELLREDRNCIIVANHPSLIDYVLIASQLPQCDCLVKAAIWENP HHHHHHCCCEEEEECHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCH FMKRIVKAAGYIPNQTPDDLLERCEERFSRGNVLLVFPEGTRTTPGIEPSLQRGAAQIAT HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH RTQTDLRVIHITVSPTFLTKEKKWYQVPATKPFFHIAVKGKIDVAPFIENSNNLTSAARR CCCCCEEEEEEEECCEEEECCCCEEECCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHH LNQHLAQTIFPSEENI HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA