Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is yfjG [C]

Identifier: 218708664

GI number: 218708664

Start: 669834

End: 670262

Strand: Direct

Name: yfjG [C]

Synonym: VS_0643

Alternate gene names: 218708664

Gene position: 669834-670262 (Clockwise)

Preceding gene: 218708662

Following gene: 218708665

Centisome position: 20.3

GC content: 44.76

Gene sequence:

>429_bases
ATGCCAAAGGTTACTCGTTCAGCATTAGTGTCGTTTAGTGCCGACCAGATGTTCAGCTTGGTCAATGATGTTGCTCGTTA
TCATGAGTTTTTGCCAGGGTGTTCTGGTTCACGTGTGATCGAATCTTCAGATTCAGCTATGGTGGCTTCGGTTGATGTAT
CTAAAGCCGGTATCAGCAAAACATTTACTACGTCTAACCGTTTAGCGGATGGCGCTGAGATTTTGATGGAGCTGGTGGAC
GGCCCATTTAAGAAACTGCAGGGCGGTTGGTATTTCACTCCGCTCGACGATCAAGCGTGTAAGGTTGAGCTTAAGTTAGA
GTTTGAATTCTCTAGCCGAATGATTGAAATGGCATTTGGTAAGGTTTTCAATGAGCTGACGAGCAATATGGTCAGTGCTT
TTACTCAACGAGCGAAACAGGTTTACTAA

Upstream 100 bases:

>100_bases
TTGCACCCTAGTTGGGGAATCCTTTTTATTTGCGCTCTGGCCCAATACAATTAAAATTGCAGTTTGTGTTAATGTAACGC
TGTCTTTAACAGGAGTCTAT

Downstream 100 bases:

>100_bases
GCCATGACTATTGAATCAGATATGATCCACGTTGAGGTTGTGTTTGCACTTCCGCACGAACAGCGTGTGTTTACCTTGGT
AGTGAACAAGAACGCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPKVTRSALVSFSADQMFSLVNDVARYHEFLPGCSGSRVIESSDSAMVASVDVSKAGISKTFTTSNRLADGAEILMELVD
GPFKKLQGGWYFTPLDDQACKVELKLEFEFSSRMIEMAFGKVFNELTSNMVSAFTQRAKQVY

Sequences:

>Translated_142_residues
MPKVTRSALVSFSADQMFSLVNDVARYHEFLPGCSGSRVIESSDSAMVASVDVSKAGISKTFTTSNRLADGAEILMELVD
GPFKKLQGGWYFTPLDDQACKVELKLEFEFSSRMIEMAFGKVFNELTSNMVSAFTQRAKQVY
>Mature_141_residues
PKVTRSALVSFSADQMFSLVNDVARYHEFLPGCSGSRVIESSDSAMVASVDVSKAGISKTFTTSNRLADGAEILMELVDG
PFKKLQGGWYFTPLDDQACKVELKLEFEFSSRMIEMAFGKVFNELTSNMVSAFTQRAKQVY

Specific function: Unknown

COG id: COG2867

COG function: function code I; Oligoketide cyclase/lipid transport protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0083 family [H]

Homologues:

Organism=Escherichia coli, GI1788972, Length=142, Percent_Identity=63.3802816901408, Blast_Score=205, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI115532702, Length=140, Percent_Identity=29.2857142857143, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005031 [H]

Pfam domain/function: PF03364 Polyketide_cyc [H]

EC number: NA

Molecular weight: Translated: 15717; Mature: 15586

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVTRSALVSFSADQMFSLVNDVARYHEFLPGCSGSRVIESSDSAMVASVDVSKAGISK
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCHHHCCCH
TFTTSNRLADGAEILMELVDGPFKKLQGGWYFTPLDDQACKVELKLEFEFSSRMIEMAFG
HCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEECCCCCCCEEEEEEEEECHHHHHHHHHHH
KVFNELTSNMVSAFTQRAKQVY
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKVTRSALVSFSADQMFSLVNDVARYHEFLPGCSGSRVIESSDSAMVASVDVSKAGISK
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCHHHCCCH
TFTTSNRLADGAEILMELVDGPFKKLQGGWYFTPLDDQACKVELKLEFEFSSRMIEMAFG
HCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEECCCCCCCEEEEEEEEECHHHHHHHHHHH
KVFNELTSNMVSAFTQRAKQVY
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA