Click here to switch to the map view.

The map label for this gene is yfgM [C]

Identifier: 218708643

GI number: 218708643

Start: 643288

End: 643902

Strand: Direct

Name: yfgM [C]

Synonym: VS_0621

Alternate gene names: 218708643

Gene position: 643288-643902 (Clockwise)

Preceding gene: 218708642

Following gene: 218708644

Centisome position: 19.5

GC content: 46.5

Gene sequence:

>615_bases
GTGGAACTTTACGATAGCGAAGAGCAACAAGTTGAAGCCATCAAAGATTGGTGGAAAGAGAATGGCAAAGCCGTAATCTT
TGGTGCGGTTATTGGTTTAGGTGGCCTATTTGGTTGGCGCTATTACCAAGATTCAGTCGTTGAAGCGCGTGAAGCCGCTT
CAGAAAGCTACACCTCTGCAATCTCAGCTCTAGATGCTAAAGGCGTTGATGCTCAATCTGATATTCAAGCTTTCATCGAC
GCAAACAAAGACGCTGAATATTCAGTACTTGCTGCTATGCAATTAGCAAAAGCGCAAGTTCAAGCGGGTGACCTTACTGC
TGCACTAGAACAACTTGAGTGGGCAAAATCGGCAACTAAGGACGCGGCATTAGCGCCACTACTGACTTACCGTGTTGCTC
GTATCAAAGCTGAGCAAGGTGAATTTGACGCAGCATTGACTGATCTTGAAGCGATGACTGACGAATCTTGGACTGGCCGT
GTTGCTGAACTGCGTGGTGATATCTCACTTCGTAAAGGCGACACAGATGCAGCTTACAGTGCTTACTCTGAAGCTCAACA
AGCTGCTGATGCGAGCCAAACGCTTCAAATCAAACTTGACGACCTAGCTAAATAA

Upstream 100 bases:

>100_bases
GAAAAAGTTGCTGCGTTAATCTAAGCCATTGAGCAAACGCTCATCATGAATATCAACGTCAGCACTATGCTGGCGTTTAA
AGAATTAAAGAGGACAGGAA

Downstream 100 bases:

>100_bases
GGCGCTTTGAATGAAGAAGATGTTTCCAAAAGCGGCGTTGTGTGCGATTGCTCTTGGCCTGCTAGCGGGCTGTGCAAGTG
AAGAAGACACCGTAATCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MELYDSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAREAASESYTSAISALDAKGVDAQSDIQAFID
ANKDAEYSVLAAMQLAKAQVQAGDLTAALEQLEWAKSATKDAALAPLLTYRVARIKAEQGEFDAALTDLEAMTDESWTGR
VAELRGDISLRKGDTDAAYSAYSEAQQAADASQTLQIKLDDLAK

Sequences:

>Translated_204_residues
MELYDSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAREAASESYTSAISALDAKGVDAQSDIQAFID
ANKDAEYSVLAAMQLAKAQVQAGDLTAALEQLEWAKSATKDAALAPLLTYRVARIKAEQGEFDAALTDLEAMTDESWTGR
VAELRGDISLRKGDTDAAYSAYSEAQQAADASQTLQIKLDDLAK
>Mature_204_residues
MELYDSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAREAASESYTSAISALDAKGVDAQSDIQAFID
ANKDAEYSVLAAMQLAKAQVQAGDLTAALEQLEWAKSATKDAALAPLLTYRVARIKAEQGEFDAALTDLEAMTDESWTGR
VAELRGDISLRKGDTDAAYSAYSEAQQAADASQTLQIKLDDLAK

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0070 family [H]

Homologues:

Organism=Escherichia coli, GI1788860, Length=207, Percent_Identity=35.7487922705314, Blast_Score=124, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR011990 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 22115; Mature: 22115

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYDSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAREAASESYTSA
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISALDAKGVDAQSDIQAFIDANKDAEYSVLAAMQLAKAQVQAGDLTAALEQLEWAKSATK
HHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAALAPLLTYRVARIKAEQGEFDAALTDLEAMTDESWTGRVAELRGDISLRKGDTDAAYS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCHHHHH
AYSEAQQAADASQTLQIKLDDLAK
HHHHHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure
MELYDSEEQQVEAIKDWWKENGKAVIFGAVIGLGGLFGWRYYQDSVVEAREAASESYTSA
CCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISALDAKGVDAQSDIQAFIDANKDAEYSVLAAMQLAKAQVQAGDLTAALEQLEWAKSATK
HHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAALAPLLTYRVARIKAEQGEFDAALTDLEAMTDESWTGRVAELRGDISLRKGDTDAAYS
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCHHHHH
AYSEAQQAADASQTLQIKLDDLAK
HHHHHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]