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The map label for this gene is 218708379

Identifier: 218708379

GI number: 218708379

Start: 331968

End: 332396

Strand: Direct

Name: 218708379

Synonym: VS_0339

Alternate gene names: NA

Gene position: 331968-332396 (Clockwise)

Preceding gene: 218708378

Following gene: 218708380

Centisome position: 10.06

GC content: 42.42

Gene sequence:

>429_bases
ATGTTCCTTAAAAAAAGACAAGTCGGAAGCCTGTATATTGTCGTTATTTTTGTATTGGTGGTGATGGGGTTTCTTGCTAC
AACCTTAAGCCGCATAGAGTGGTCCAATAATGACGCACATACAAAAGATGTGATTGGTACTCAAGCCCATCTTTTAGCTC
ATTCGGCAATAGAGCAAGTTTTAGTGCAAATATATCCTCCTAGAGCCAATATAACGGTTCCATTTGATGTGGCTGCAGCG
TGTGCAAACTTGGACGGATCCACGATGAATTTCGCAACGACAATTACATGTGCAGATGTTCAAATAACGTGCTCACCAAC
AGGTGGTCAACTTGTCGATAGTTCTCAGTTATACACAGTAAGAGCGGTCGCAATGTGCGGAACGGGTGTGAATTTAATGC
AACGTAGTCAAGATGTGTGGGTGAGATAA

Upstream 100 bases:

>100_bases
GCAAATGTTCAGCGTAATGGTGTCGTCCATCTTGAGTTTGAATTTAGAAACCAAGTCGGGGATGAACTGACCAATTTCCA
GCAAGACATACAGGTGATCA

Downstream 100 bases:

>100_bases
TGAGAGTACTATTTTTATCATTGTTTTTGTTGTTTTCTCTCGGCACATCATCGTTTTCGTATGCTTCCACTTGTCTAGCT
AATGGCTCTTCTGTAGATGC

Product: MSHA biogenesis protein MshP

Products: NA

Alternate protein names: Exported Protein MshP

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MFLKKRQVGSLYIVVIFVLVVMGFLATTLSRIEWSNNDAHTKDVIGTQAHLLAHSAIEQVLVQIYPPRANITVPFDVAAA
CANLDGSTMNFATTITCADVQITCSPTGGQLVDSSQLYTVRAVAMCGTGVNLMQRSQDVWVR

Sequences:

>Translated_142_residues
MFLKKRQVGSLYIVVIFVLVVMGFLATTLSRIEWSNNDAHTKDVIGTQAHLLAHSAIEQVLVQIYPPRANITVPFDVAAA
CANLDGSTMNFATTITCADVQITCSPTGGQLVDSSQLYTVRAVAMCGTGVNLMQRSQDVWVR
>Mature_142_residues
MFLKKRQVGSLYIVVIFVLVVMGFLATTLSRIEWSNNDAHTKDVIGTQAHLLAHSAIEQVLVQIYPPRANITVPFDVAAA
CANLDGSTMNFATTITCADVQITCSPTGGQLVDSSQLYTVRAVAMCGTGVNLMQRSQDVWVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15418; Mature: 15418

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKKRQVGSLYIVVIFVLVVMGFLATTLSRIEWSNNDAHTKDVIGTQAHLLAHSAIEQV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHH
LVQIYPPRANITVPFDVAAACANLDGSTMNFATTITCADVQITCSPTGGQLVDSSQLYTV
HHEEECCCCCEEECHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCCEECCCCHHHE
RAVAMCGTGVNLMQRSQDVWVR
EEEEHHCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MFLKKRQVGSLYIVVIFVLVVMGFLATTLSRIEWSNNDAHTKDVIGTQAHLLAHSAIEQV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHH
LVQIYPPRANITVPFDVAAACANLDGSTMNFATTITCADVQITCSPTGGQLVDSSQLYTV
HHEEECCCCCEEECHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCCEECCCCHHHE
RAVAMCGTGVNLMQRSQDVWVR
EEEEHHCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA