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The map label for this gene is 218708374

Identifier: 218708374

GI number: 218708374

Start: 328864

End: 329439

Strand: Direct

Name: 218708374

Synonym: VS_0334

Alternate gene names: NA

Gene position: 328864-329439 (Clockwise)

Preceding gene: 218708373

Following gene: 218708375

Centisome position: 9.97

GC content: 42.19

Gene sequence:

>576_bases
GTGCTTAAAAATCAAAAGGGTTTCTCCCTAGTCGAGTTGGTCATAGTGATTGTCGTCGTGGGCTTATTAGCCGTTGCTGC
TTTACCCCGCTTCTTAGATGTGACAGACGAAGCTAAGAAAGCCAGTATTGAAGGTGTCGCGGGTGGTTTTGCGACAGGAG
TGCTTTCAGCAAGAGCTCAATGGGAAGCAGAAGCTCGTCCATCAGAAAGAATTGGTGTTGAAATATACAATACTGTAAAT
TACGATGGTGTTGATTTTTGGCTAACCAGATCAACAAGTAGCAATGGACGTACTAATTTTAGAGACGGCTACCCATGGTC
TATAAACACAAATTCAGCTTCAGCTCCGTCTAATGATGTGACTGATGCTTCGTGTGTCGATTTAATGGAAAATCTACTTC
AGAACCCTCCTAAAGTTGGAACATTAACCAATGTGGCTAATGGTTCGAATTACAAATATTCAGCGCAAGCGGATAATAGT
AATGACTATTGCACTTACATTCAATTGGAAGGCGGTACTCAGCATCAATTCGTTTACGAGATTAGAACTGGTCGTGTGAC
CGTAACACTGCAGTAA

Upstream 100 bases:

>100_bases
GTCAATATATTGGCCTTGTGAACGTATTGACGCTGTTTTTATGGTTTTATACATATTCAAATGTATAATGCGCATTAGCA
ATTAGATGAGTAGGTAGAAA

Downstream 100 bases:

>100_bases
ACCTGCGTTAAATATACATAGAGAGAAAAGACTATGAAAAAACAAAGCGGTTTCACCCTAATAGAACTAGTGGTGGTAAT
TGTTATTCTAGGTATTCTTG

Product: MSHA pilin protein MshB

Products: NA

Alternate protein names: Methylation Site Containing Protein; Msha Pilin Protein Mshb; Pilin Protein; Prepilin-Type Cleavage/Methylation; Type IV Pilus Prepilin-Like Protein

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MLKNQKGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAEARPSERIGVEIYNTVN
YDGVDFWLTRSTSSNGRTNFRDGYPWSINTNSASAPSNDVTDASCVDLMENLLQNPPKVGTLTNVANGSNYKYSAQADNS
NDYCTYIQLEGGTQHQFVYEIRTGRVTVTLQ

Sequences:

>Translated_191_residues
MLKNQKGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAEARPSERIGVEIYNTVN
YDGVDFWLTRSTSSNGRTNFRDGYPWSINTNSASAPSNDVTDASCVDLMENLLQNPPKVGTLTNVANGSNYKYSAQADNS
NDYCTYIQLEGGTQHQFVYEIRTGRVTVTLQ
>Mature_191_residues
MLKNQKGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQWEAEARPSERIGVEIYNTVN
YDGVDFWLTRSTSSNGRTNFRDGYPWSINTNSASAPSNDVTDASCVDLMENLLQNPPKVGTLTNVANGSNYKYSAQADNS
NDYCTYIQLEGGTQHQFVYEIRTGRVTVTLQ

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20779; Mature: 20779

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNQKGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHC
WEAEARPSERIGVEIYNTVNYDGVDFWLTRSTSSNGRTNFRDGYPWSINTNSASAPSNDV
CCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC
TDASCVDLMENLLQNPPKVGTLTNVANGSNYKYSAQADNSNDYCTYIQLEGGTQHQFVYE
CCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEE
IRTGRVTVTLQ
EECCEEEEEEC
>Mature Secondary Structure
MLKNQKGFSLVELVIVIVVVGLLAVAALPRFLDVTDEAKKASIEGVAGGFATGVLSARAQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHC
WEAEARPSERIGVEIYNTVNYDGVDFWLTRSTSSNGRTNFRDGYPWSINTNSASAPSNDV
CCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCC
TDASCVDLMENLLQNPPKVGTLTNVANGSNYKYSAQADNSNDYCTYIQLEGGTQHQFVYE
CCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEE
IRTGRVTVTLQ
EECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA