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The map label for this gene is 218708370

Identifier: 218708370

GI number: 218708370

Start: 324173

End: 325375

Strand: Direct

Name: 218708370

Synonym: VS_0330

Alternate gene names: NA

Gene position: 324173-325375 (Clockwise)

Preceding gene: 218708369

Following gene: 218708371

Centisome position: 9.83

GC content: 43.47

Gene sequence:

>1203_bases
TTGGAACTAATTATGAGCGTCATTAATAACGCCTTGTCTGAATTGGCAAAAAAAGAGTCAACAGCATCGATTGAAGCTGC
GGTGGTACCTAAAGTAAAAACACGCTCTCCATTGGTTTGGGTGGTCGCAGGTTTTACCCTTAGCTTGGCCATGGGGGGCT
GGGCTATATCACAAGGCCCTGCTGTCGATAACTCAATATCAACTCGAGATATACAAGTTTCCGTTATTGATACTTCAGAA
GGCAATTCAGAGGGTAGTCCTGAAGCGGCCATTACTCAACCTGTGTCCTCGCCGACTAAGAAGTTAGTGACGCTAGATTC
AGCGAACCTTTCGGCTCCCAACACGACAATACTAAAAAGTACTCAAGCTAAATCTGATTCAGTTATTGCATCAACTGAAT
CAGTTACAAAGCCTAAAGTAAACCCTGAATATCAAGCCATACCTAAATCTCAAAGCGCACCTAAAGCTCAAAGTATACCT
AAAGAAAAAGTAGCAAAGCCAATGCTTGTTGCTAGCGTGGCTAAAAAAGATCTCGCACCAGTATCTAATCAGCCTGAAAC
GTCTGGCGATTCAGACAACAGTGGAATGTTGATTGAGCAGGTGGAATTGACGCCTGAGCAGTTATCAGTGAATGCACAAG
GGCGAGCTCAAAAAGCGCTGGATGCCAATGATCTTACAGGTGCTTTGAAAGGTTACACTGAAGCTTTGCGCTATACTCCT
CGAAATGAAGACGTGCGCCAGAAACTCGCTATCCTCTATTTTGGGAAAGGTGATACGCGAAAAGCCTATGAGTTATTTCA
GTCGGGCATCAAACTTAATATCAACAGTGAAAAACTGCGCTTAGGTTTATCGAAGTTACTCGTGAAAGCCAATCAGGCAG
AAGCCGCTTTGAGCCCATTAATACATTTATCGCCTAGTCCAACTCAAGACTACTTAGCAATGCGCGCTGCATTAAGTCAA
AAGTCTCAACAAGAAGAAATCGCACTAGAGAGTTACCAAAAATTGACTGAGGTCGATTCAGATAATGCTCGCTGGTGGTT
AGGTTTAGCGATTCAACAAGAGCGTCAACTTGATTTCACGGCTGCAAAGCAATCATACCAAGGAGCATTGGTTAGAGTTG
GGATCTCATCTCAGTCGCAAGGCTTTGTACGTGATCGTTTAAAAATACTCAATGCTTTAGAGGAGAGTAGCGATGCAAAT
TAG

Upstream 100 bases:

>100_bases
GTGAAGATAAGAAAAATATAGAAAACCAACATCTCTTTGCTGCAATGCATGAAACATACGATGTGTGTAAACCTAAATTT
AAAACGCCAATGCTGTGGGG

Downstream 100 bases:

>100_bases
ATTAAGAAAAAGGCTCGGTGATTTGCTCGTAGAAGAGGGCATCATTACTGAATATCAAGTTGAACAAGCTCTGGCCGCTC
AAAAAAGGACAGGCCGTAAG

Product: MSHA biogenesis protein MshN

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshN; Mannose-Sensitive Agglutinin; Msha Biogenesis Protein Mshn; TPR Domain-Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin D; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MELIMSVINNALSELAKKESTASIEAAVVPKVKTRSPLVWVVAGFTLSLAMGGWAISQGPAVDNSISTRDIQVSVIDTSE
GNSEGSPEAAITQPVSSPTKKLVTLDSANLSAPNTTILKSTQAKSDSVIASTESVTKPKVNPEYQAIPKSQSAPKAQSIP
KEKVAKPMLVASVAKKDLAPVSNQPETSGDSDNSGMLIEQVELTPEQLSVNAQGRAQKALDANDLTGALKGYTEALRYTP
RNEDVRQKLAILYFGKGDTRKAYELFQSGIKLNINSEKLRLGLSKLLVKANQAEAALSPLIHLSPSPTQDYLAMRAALSQ
KSQQEEIALESYQKLTEVDSDNARWWLGLAIQQERQLDFTAAKQSYQGALVRVGISSQSQGFVRDRLKILNALEESSDAN

Sequences:

>Translated_400_residues
MELIMSVINNALSELAKKESTASIEAAVVPKVKTRSPLVWVVAGFTLSLAMGGWAISQGPAVDNSISTRDIQVSVIDTSE
GNSEGSPEAAITQPVSSPTKKLVTLDSANLSAPNTTILKSTQAKSDSVIASTESVTKPKVNPEYQAIPKSQSAPKAQSIP
KEKVAKPMLVASVAKKDLAPVSNQPETSGDSDNSGMLIEQVELTPEQLSVNAQGRAQKALDANDLTGALKGYTEALRYTP
RNEDVRQKLAILYFGKGDTRKAYELFQSGIKLNINSEKLRLGLSKLLVKANQAEAALSPLIHLSPSPTQDYLAMRAALSQ
KSQQEEIALESYQKLTEVDSDNARWWLGLAIQQERQLDFTAAKQSYQGALVRVGISSQSQGFVRDRLKILNALEESSDAN
>Mature_400_residues
MELIMSVINNALSELAKKESTASIEAAVVPKVKTRSPLVWVVAGFTLSLAMGGWAISQGPAVDNSISTRDIQVSVIDTSE
GNSEGSPEAAITQPVSSPTKKLVTLDSANLSAPNTTILKSTQAKSDSVIASTESVTKPKVNPEYQAIPKSQSAPKAQSIP
KEKVAKPMLVASVAKKDLAPVSNQPETSGDSDNSGMLIEQVELTPEQLSVNAQGRAQKALDANDLTGALKGYTEALRYTP
RNEDVRQKLAILYFGKGDTRKAYELFQSGIKLNINSEKLRLGLSKLLVKANQAEAALSPLIHLSPSPTQDYLAMRAALSQ
KSQQEEIALESYQKLTEVDSDNARWWLGLAIQQERQLDFTAAKQSYQGALVRVGISSQSQGFVRDRLKILNALEESSDAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43050; Mature: 43050

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIMSVINNALSELAKKESTASIEAAVVPKVKTRSPLVWVVAGFTLSLAMGGWAISQGP
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHCCEEECCCC
AVDNSISTRDIQVSVIDTSEGNSEGSPEAAITQPVSSPTKKLVTLDSANLSAPNTTILKS
CCCCCCCCCEEEEEEEECCCCCCCCCCCHHEECCCCCCCCEEEEEECCCCCCCCCEEEEC
TQAKSDSVIASTESVTKPKVNPEYQAIPKSQSAPKAQSIPKEKVAKPMLVASVAKKDLAP
CCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCHHCCCHHHHHCHHHHHHHHHHHCCC
VSNQPETSGDSDNSGMLIEQVELTPEQLSVNAQGRAQKALDANDLTGALKGYTEALRYTP
CCCCCCCCCCCCCCCEEEEEEECCHHHEECCCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
RNEDVRQKLAILYFGKGDTRKAYELFQSGIKLNINSEKLRLGLSKLLVKANQAEAALSPL
CCHHHHHEEEEEEECCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCHHHHHHCCC
IHLSPSPTQDYLAMRAALSQKSQQEEIALESYQKLTEVDSDNARWWLGLAIQQERQLDFT
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHH
AAKQSYQGALVRVGISSQSQGFVRDRLKILNALEESSDAN
HHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELIMSVINNALSELAKKESTASIEAAVVPKVKTRSPLVWVVAGFTLSLAMGGWAISQGP
CHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHCCEEECCCC
AVDNSISTRDIQVSVIDTSEGNSEGSPEAAITQPVSSPTKKLVTLDSANLSAPNTTILKS
CCCCCCCCCEEEEEEEECCCCCCCCCCCHHEECCCCCCCCEEEEEECCCCCCCCCEEEEC
TQAKSDSVIASTESVTKPKVNPEYQAIPKSQSAPKAQSIPKEKVAKPMLVASVAKKDLAP
CCCCCCCEEECCCCCCCCCCCCCHHCCCCCCCCCCHHCCCHHHHHCHHHHHHHHHHHCCC
VSNQPETSGDSDNSGMLIEQVELTPEQLSVNAQGRAQKALDANDLTGALKGYTEALRYTP
CCCCCCCCCCCCCCCEEEEEEECCHHHEECCCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
RNEDVRQKLAILYFGKGDTRKAYELFQSGIKLNINSEKLRLGLSKLLVKANQAEAALSPL
CCHHHHHEEEEEEECCCCCHHHHHHHHCCCEEEECHHHHHHHHHHHHHHCCHHHHHHCCC
IHLSPSPTQDYLAMRAALSQKSQQEEIALESYQKLTEVDSDNARWWLGLAIQQERQLDFT
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHH
AAKQSYQGALVRVGISSQSQGFVRDRLKILNALEESSDAN
HHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA