| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is cysH
Identifier: 218708354
GI number: 218708354
Start: 293825
End: 294601
Strand: Direct
Name: cysH
Synonym: VS_0301
Alternate gene names: 218708354
Gene position: 293825-294601 (Clockwise)
Preceding gene: 218708353
Following gene: 218708356
Centisome position: 8.91
GC content: 42.86
Gene sequence:
>777_bases ATGCATAATTCTGTCGCTTCAAAACTGAAGTTAGCAGAGCTACTCGCATTGACTAAGACGGAGCAGATACTTCGTCTTGG ACAAATTAATGCTGAGTTAGAACAGCTAACCGCATTAGAAAGAGTGAAGTGGGCTCTAGAAAACTTAGAAGGAACACATG TGGTGTCTTCTAGTTTCGGAATCCAAGCAGCATTGATGCTGCACTTAGTGACTCAAGCCAAATCCGATATTCCAGTTATT CTGACAGACACCGGGTACCTATTCCCAGAAACGTATCGCTTTATAGATGAGTTAAGTCAGAAGTTGACTCTAAACCTTCA AGTCTTTCGCGCACAACAGAGCTCTAATTGGCAAGAAGCGCAATATGGCAAACTTTGGGATCAAGGTATAGAAGGGATAG AGAAGTACAACAAGCTTAATAAAGTTGAACCGATGAGAAGAGCGCTGGATGAACTAGAGGCTGGCACTTGGTTTTCAGGG TTGCGAAGAGAGCAATCTCAATCGCGCGCAAACTTGCCTATCTTATCTATCCAAAATGGTGTGTTTAAGTTCTTGCCAGT AATTGATTGGACAAATAAAGATGTTCATTATTACTTAGAAGAGCATGGTCTCAGTTACCACCCACTTCGCGAGCAGGGGT ACCTTTCTGTTGGAGATACTCATACGACTAAGAAATGGGAACCGGGTATGACTGAAGAAGAAACCCGGTTCAATGGTCTA AAACGAGAATGTGGTCTCCATGAAGACGATGGAGAGCAATATGGTTCTGGGATTTAG
Upstream 100 bases:
>100_bases GGGCGTTGGGCTACGGAACGAACGGATAATGAAGGGTTCGGTGATTTTACAATCCGAGCTGGCATCATCGAAGAGGTGAT CATTTCAAAGAGGGATCTGC
Downstream 100 bases:
>100_bases ACTCATTGCCATTTAAAAAGCTGCCTCAAGGCAGCTTTTTTAGTTTCTAGGGGATGAAATTAAAGCGATTGTGGATAAGT CTGTGGTTATTATGTAGGTA
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MHNSVASKLKLAELLALTKTEQILRLGQINAELEQLTALERVKWALENLEGTHVVSSSFGIQAALMLHLVTQAKSDIPVI LTDTGYLFPETYRFIDELSQKLTLNLQVFRAQQSSNWQEAQYGKLWDQGIEGIEKYNKLNKVEPMRRALDELEAGTWFSG LRREQSQSRANLPILSIQNGVFKFLPVIDWTNKDVHYYLEEHGLSYHPLREQGYLSVGDTHTTKKWEPGMTEEETRFNGL KRECGLHEDDGEQYGSGI
Sequences:
>Translated_258_residues MHNSVASKLKLAELLALTKTEQILRLGQINAELEQLTALERVKWALENLEGTHVVSSSFGIQAALMLHLVTQAKSDIPVI LTDTGYLFPETYRFIDELSQKLTLNLQVFRAQQSSNWQEAQYGKLWDQGIEGIEKYNKLNKVEPMRRALDELEAGTWFSG LRREQSQSRANLPILSIQNGVFKFLPVIDWTNKDVHYYLEEHGLSYHPLREQGYLSVGDTHTTKKWEPGMTEEETRFNGL KRECGLHEDDGEQYGSGI >Mature_258_residues MHNSVASKLKLAELLALTKTEQILRLGQINAELEQLTALERVKWALENLEGTHVVSSSFGIQAALMLHLVTQAKSDIPVI LTDTGYLFPETYRFIDELSQKLTLNLQVFRAQQSSNWQEAQYGKLWDQGIEGIEKYNKLNKVEPMRRALDELEAGTWFSG LRREQSQSRANLPILSIQNGVFKFLPVIDWTNKDVHYYLEEHGLSYHPLREQGYLSVGDTHTTKKWEPGMTEEETRFNGL KRECGLHEDDGEQYGSGI
Specific function: Reduction of activated sulfate into sulfite
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily
Homologues:
Organism=Escherichia coli, GI1789121, Length=242, Percent_Identity=71.4876033057851, Blast_Score=366, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6325425, Length=233, Percent_Identity=30.0429184549356, Blast_Score=98, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSH_VIBSL (B7VI86)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002415975.1 - GeneID: 7159952 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0301 - HOGENOM: HBG758022 - OMA: TNFRPYE - ProtClustDB: PRK02090 - GO: GO:0005737 - HAMAP: MF_00063 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00434 - TIGRFAMs: TIGR02057
Pfam domain/function: PF01507 PAPS_reduct
EC number: =1.8.4.8
Molecular weight: Translated: 29523; Mature: 29523
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNSVASKLKLAELLALTKTEQILRLGQINAELEQLTALERVKWALENLEGTHVVSSSFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC IQAALMLHLVTQAKSDIPVILTDTGYLFPETYRFIDELSQKLTLNLQVFRAQQSSNWQEA HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHH QYGKLWDQGIEGIEKYNKLNKVEPMRRALDELEAGTWFSGLRREQSQSRANLPILSIQNG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCC VFKFLPVIDWTNKDVHYYLEEHGLSYHPLREQGYLSVGDTHTTKKWEPGMTEEETRFNGL HHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHH KRECGLHEDDGEQYGSGI HHHCCCCCCCHHHCCCCC >Mature Secondary Structure MHNSVASKLKLAELLALTKTEQILRLGQINAELEQLTALERVKWALENLEGTHVVSSSFG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC IQAALMLHLVTQAKSDIPVILTDTGYLFPETYRFIDELSQKLTLNLQVFRAQQSSNWQEA HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHH QYGKLWDQGIEGIEKYNKLNKVEPMRRALDELEAGTWFSGLRREQSQSRANLPILSIQNG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCC VFKFLPVIDWTNKDVHYYLEEHGLSYHPLREQGYLSVGDTHTTKKWEPGMTEEETRFNGL HHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHH KRECGLHEDDGEQYGSGI HHHCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA