Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

Click here to switch to the map view.

The map label for this gene is 218708351

Identifier: 218708351

GI number: 218708351

Start: 289886

End: 290116

Strand: Direct

Name: 218708351

Synonym: VS_0298

Alternate gene names: NA

Gene position: 289886-290116 (Clockwise)

Preceding gene: 218708350

Following gene: 218708352

Centisome position: 8.79

GC content: 42.86

Gene sequence:

>231_bases
ATGACACTCAATGAATTACGAAATTTATATCGAGAAAATCTGTTGGTTGAAGCGATCATAGAGCCCTCAATTCAAGAGGG
GTCTTGGGTTGTGGAGTTTCGCCATATGGGCGGTGGCTTTGTTTTGCTTACTGATGTTCATGGTGAAGAGTGTCATTACG
CGGATTTAGACCTAGCATCTAAGTCGGCAATGGCGGTTGGCTTTCAACAAGTTCGTATTGAAAACCAGTAA

Upstream 100 bases:

>100_bases
GTTAGCACATTCATCACTTTCGACCATCCTTAATACAGAGATCTAATTAGCGTCTATTCTTATAAGGTCTATGTTGTGAG
GTCAAAGCAAGGGATGGAAT

Downstream 100 bases:

>100_bases
CTCAATTGACGTTTCAATCGGTTTTTACTTCCAAAAAGTTATAAAACATACTTTTCTATTCTTTCTTGTTATTAAAAGGA
GTGGTTAATCTATCGTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 76; Mature: 75

Protein sequence:

>76_residues
MTLNELRNLYRENLLVEAIIEPSIQEGSWVVEFRHMGGGFVLLTDVHGEECHYADLDLASKSAMAVGFQQVRIENQ

Sequences:

>Translated_76_residues
MTLNELRNLYRENLLVEAIIEPSIQEGSWVVEFRHMGGGFVLLTDVHGEECHYADLDLASKSAMAVGFQQVRIENQ
>Mature_75_residues
TLNELRNLYRENLLVEAIIEPSIQEGSWVVEFRHMGGGFVLLTDVHGEECHYADLDLASKSAMAVGFQQVRIENQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8620; Mature: 8489

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNELRNLYRENLLVEAIIEPSIQEGSWVVEFRHMGGGFVLLTDVHGEECHYADLDLAS
CCHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC
KSAMAVGFQQVRIENQ
CCHHHCCCEEEEEECC
>Mature Secondary Structure 
TLNELRNLYRENLLVEAIIEPSIQEGSWVVEFRHMGGGFVLLTDVHGEECHYADLDLAS
CHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCC
KSAMAVGFQQVRIENQ
CCHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA