| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is wzc [H]
Identifier: 218708277
GI number: 218708277
Start: 208009
End: 210177
Strand: Direct
Name: wzc [H]
Synonym: VS_0215
Alternate gene names: 218708277
Gene position: 208009-210177 (Clockwise)
Preceding gene: 218708276
Following gene: 218708278
Centisome position: 6.3
GC content: 42.69
Gene sequence:
>2169_bases ATGACAATACAACCATCTCAGCAATCACACACAGATAACTCTGATGAGATAGATTTAGGGAAACTGCTTGGTATCTTATT AGATGCTAAATGGCTAATCATGCTGACCACATTCGTTTTTTCTGTGTTTGGTATTGCGTTTGCCCTCCTTTCAACTCCGA TATACAAAGCAGATGCATTAATTCAAATTGAAGAAAAGAGCTCTGGTGGCATTTCATCAATGGTCGGTGACATGGGCGAG TTGTTTTCTCAGGAATCTTCTGCGACGACAGAAGTTGAGATCATTAAATCTCGTATGATCTTGGGTGAAACGGTTGATAA GTTTAACTTAACCACCGTAACTTCACCGAACTATGCACCAATCATTGGTAAAGGACTCGCTCGCTTAACCGGTAACATCA ACCATATTGCAGTGAGCCGTTTTACGTTGCCAAGCCATATGGAGGATTACACACACACGATTCAGATTCTTGATGTTGAG CAAGGTACTTACCAACTCGTTCGTGATGATGAACGTATTATCTTTAAAGGTAAAGTAGGTGAACTCGTGACAGCAGACGA TTACAGCTTGTTTGTGGCTGGCTTCGAGTCAAACAATGGCTTTGAATTTACCATTGGTAAACGCAGCAGATTAGAAGCTA TCGAGTGGCTGAAATCTTCTTTGTCTCTGTCTGAGCAAGGTAAGCAAACTGGTATTTTGAAGCTAAGCTTTGAAGGCGAA AACAAGCTGAAGATCTCTGAGATACTCAACCATATCAGCCAGATATATTTCTTACAAAACGTGAAACGTAATTCAGCGGA AGCAGAGAAGAGCCTATCGTTCTTAGAAAGCCATCTTCCAGGCATTAAGTCTGAGTTAACTGGTTACGAAGACATATTAA ACAACTATCGCCAAGAAAACGAATCGATCGACTTGGGCTTAGAAGCACAATCAACCTTGAGGGTAATGGTAGAGCTTGAA GCGCAATTGAATGAGCTGACGTTCAAAGAGAGCGAAATAAGCCAACGTTTTACTAAAGATCACCCGGCATACAAAGCATT GTTGGATAAGCGTAAAACGCTATTGGGCGAGAAAGAACGTCAGAACAAGCAAGTGCAAAAATTACCAAAGACACAGCGCG AAGTGCTACGTATGACTCGTGATGTTGAAGTAAACCAGCAGATCTACATCCAACTGATGAATAAAGTTCAGGAGCTGGGC ATTATCAAAGCCGGCACCGTAGGTAACGTTCGTATCTTAGATGACGCTCAAACTTATGCTCACGCAGTTAAACCTAAGAA GCCGCTGATTGTTGTGTTAGCTACGCTACTGGGTGGTATGCTAAGTATCGCGTTTGTGTTAGTAAAAGCGGCGTTCCACC GAGGTGTTGACAGCCCGGACCAAATTGAACAGATTGGCCTACCAGTATACGCAGCCGTACCAAAATCAGACTTTCAGATA GAGCTAACTAACCGCTTTAAATCGAAGAAGAAGAACCAGGGGACTCAAGCGCTGCTTGCTGAATCTAACCCTGCGGATCT TTCGGTTGAAGCACTGCGTGGCCTTCGTACTAGCTTGCACTTCGCGATGCTAGAAGCGAAAAACAACATTCTGATGATTT CAGGTCCTGCTCCGGGCATTGGTAAATCATTTATTTCGACCAACTTCTCCGCAGTAGCAGCCCAAACAGGTCAAAAAGTA CTGTTGATTGATGCCGATATGCGTAAAGGTTACCTACAACAAAGCTTTGGTGTTAACTGGGATAACGGTCTTTCGGATGT ATTAAGCGGTAAGCAAGAGTTTGCTCAGTCCATTAAAACAACAGCAATAGAGAACCTAGAAATTATTACTCGCGGTCAAG TACCACCCAACCCATCTGAATTGTTGATGCACCCACGCTTTGCCGAACTAATGGAGTGGGCTTCAAAAGAGTACGACTTA GTGATTGTTGATACCCCTCCAATACTTGCTGTAACCGATCCAAGTATTGTTGGCGCTTTTGCTGGTACTACATTAATGGT GGCCCGTTTTGGTCAAAATACCATTAAAGAAATCGATGTTGCTCGTAATCGCTTCGAACAGTCTGGTATTGAAGTTAAAG GTGTTATCTTTAACGCCATCGAAAAGAAAGCATCAAGTTCTTATGGCTACGGTTACTACAACTATGCATATTCGAGTAAC AATACGTAA
Upstream 100 bases:
>100_bases TAAGCTTGAATTACCAACGATAGAATCTCATAAGAGAGAAGGGTACGTAAGCCGTACGTCACTTATCTTAAAAAATATTA GTTTAGGAAGTAGTAATCTG
Downstream 100 bases:
>100_bases TATATCATCAGATGCCAAAGAGCAGTAACGAGATGCGAGTAATCGGAAAGATAGAATCTGGCACGTATCCCTCTTACTTG TCACTCTAGTCTAACTTTTC
Product: putative tyrosine-protein kinase
Products: ADP; protein tyrosine phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 722; Mature: 721
Protein sequence:
>722_residues MTIQPSQQSHTDNSDEIDLGKLLGILLDAKWLIMLTTFVFSVFGIAFALLSTPIYKADALIQIEEKSSGGISSMVGDMGE LFSQESSATTEVEIIKSRMILGETVDKFNLTTVTSPNYAPIIGKGLARLTGNINHIAVSRFTLPSHMEDYTHTIQILDVE QGTYQLVRDDERIIFKGKVGELVTADDYSLFVAGFESNNGFEFTIGKRSRLEAIEWLKSSLSLSEQGKQTGILKLSFEGE NKLKISEILNHISQIYFLQNVKRNSAEAEKSLSFLESHLPGIKSELTGYEDILNNYRQENESIDLGLEAQSTLRVMVELE AQLNELTFKESEISQRFTKDHPAYKALLDKRKTLLGEKERQNKQVQKLPKTQREVLRMTRDVEVNQQIYIQLMNKVQELG IIKAGTVGNVRILDDAQTYAHAVKPKKPLIVVLATLLGGMLSIAFVLVKAAFHRGVDSPDQIEQIGLPVYAAVPKSDFQI ELTNRFKSKKKNQGTQALLAESNPADLSVEALRGLRTSLHFAMLEAKNNILMISGPAPGIGKSFISTNFSAVAAQTGQKV LLIDADMRKGYLQQSFGVNWDNGLSDVLSGKQEFAQSIKTTAIENLEIITRGQVPPNPSELLMHPRFAELMEWASKEYDL VIVDTPPILAVTDPSIVGAFAGTTLMVARFGQNTIKEIDVARNRFEQSGIEVKGVIFNAIEKKASSSYGYGYYNYAYSSN NT
Sequences:
>Translated_722_residues MTIQPSQQSHTDNSDEIDLGKLLGILLDAKWLIMLTTFVFSVFGIAFALLSTPIYKADALIQIEEKSSGGISSMVGDMGE LFSQESSATTEVEIIKSRMILGETVDKFNLTTVTSPNYAPIIGKGLARLTGNINHIAVSRFTLPSHMEDYTHTIQILDVE QGTYQLVRDDERIIFKGKVGELVTADDYSLFVAGFESNNGFEFTIGKRSRLEAIEWLKSSLSLSEQGKQTGILKLSFEGE NKLKISEILNHISQIYFLQNVKRNSAEAEKSLSFLESHLPGIKSELTGYEDILNNYRQENESIDLGLEAQSTLRVMVELE AQLNELTFKESEISQRFTKDHPAYKALLDKRKTLLGEKERQNKQVQKLPKTQREVLRMTRDVEVNQQIYIQLMNKVQELG IIKAGTVGNVRILDDAQTYAHAVKPKKPLIVVLATLLGGMLSIAFVLVKAAFHRGVDSPDQIEQIGLPVYAAVPKSDFQI ELTNRFKSKKKNQGTQALLAESNPADLSVEALRGLRTSLHFAMLEAKNNILMISGPAPGIGKSFISTNFSAVAAQTGQKV LLIDADMRKGYLQQSFGVNWDNGLSDVLSGKQEFAQSIKTTAIENLEIITRGQVPPNPSELLMHPRFAELMEWASKEYDL VIVDTPPILAVTDPSIVGAFAGTTLMVARFGQNTIKEIDVARNRFEQSGIEVKGVIFNAIEKKASSSYGYGYYNYAYSSN NT >Mature_721_residues TIQPSQQSHTDNSDEIDLGKLLGILLDAKWLIMLTTFVFSVFGIAFALLSTPIYKADALIQIEEKSSGGISSMVGDMGEL FSQESSATTEVEIIKSRMILGETVDKFNLTTVTSPNYAPIIGKGLARLTGNINHIAVSRFTLPSHMEDYTHTIQILDVEQ GTYQLVRDDERIIFKGKVGELVTADDYSLFVAGFESNNGFEFTIGKRSRLEAIEWLKSSLSLSEQGKQTGILKLSFEGEN KLKISEILNHISQIYFLQNVKRNSAEAEKSLSFLESHLPGIKSELTGYEDILNNYRQENESIDLGLEAQSTLRVMVELEA QLNELTFKESEISQRFTKDHPAYKALLDKRKTLLGEKERQNKQVQKLPKTQREVLRMTRDVEVNQQIYIQLMNKVQELGI IKAGTVGNVRILDDAQTYAHAVKPKKPLIVVLATLLGGMLSIAFVLVKAAFHRGVDSPDQIEQIGLPVYAAVPKSDFQIE LTNRFKSKKKNQGTQALLAESNPADLSVEALRGLRTSLHFAMLEAKNNILMISGPAPGIGKSFISTNFSAVAAQTGQKVL LIDADMRKGYLQQSFGVNWDNGLSDVLSGKQEFAQSIKTTAIENLEIITRGQVPPNPSELLMHPRFAELMEWASKEYDLV IVDTPPILAVTDPSIVGAFAGTTLMVARFGQNTIKEIDVARNRFEQSGIEVKGVIFNAIEKKASSSYGYGYYNYAYSSNN T
Specific function: Required for the extracellular polysaccharide colanic acid synthesis. The autophosphorylated form is inactive. Probably involved in the export of colanic acid from the cell to medium. Phosphorylates udg [H]
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the etk/wzc family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=714, Percent_Identity=47.7591036414566, Blast_Score=677, Evalue=0.0, Organism=Escherichia coli, GI1787216, Length=704, Percent_Identity=45.4545454545455, Blast_Score=618, Evalue=1e-178,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: 2.7.1.112 [C]
Molecular weight: Translated: 80119; Mature: 79987
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIQPSQQSHTDNSDEIDLGKLLGILLDAKWLIMLTTFVFSVFGIAFALLSTPIYKADAL CCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IQIEEKSSGGISSMVGDMGELFSQESSATTEVEIIKSRMILGETVDKFNLTTVTSPNYAP EEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC IIGKGLARLTGNINHIAVSRFTLPSHMEDYTHTIQILDVEQGTYQLVRDDERIIFKGKVG HHHHHHHHHCCCCCEEEEEEEECCHHHHCCCEEEEEEEECCCCCCEECCCCEEEEECCCC ELVTADDYSLFVAGFESNNGFEFTIGKRSRLEAIEWLKSSLSLSEQGKQTGILKLSFEGE CEEEECCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC NKLKISEILNHISQIYFLQNVKRNSAEAEKSLSFLESHLPGIKSELTGYEDILNNYRQEN CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCC ESIDLGLEAQSTLRVMVELEAQLNELTFKESEISQRFTKDHPAYKALLDKRKTLLGEKER CCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH QNKQVQKLPKTQREVLRMTRDVEVNQQIYIQLMNKVQELGIIKAGTVGNVRILDDAQTYA HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECHHHHH HAVKPKKPLIVVLATLLGGMLSIAFVLVKAAFHRGVDSPDQIEQIGLPVYAAVPKSDFQI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCEE ELTNRFKSKKKNQGTQALLAESNPADLSVEALRGLRTSLHFAMLEAKNNILMISGPAPGI EEHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC GKSFISTNFSAVAAQTGQKVLLIDADMRKGYLQQSFGVNWDNGLSDVLSGKQEFAQSIKT CHHHHHCCHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHH TAIENLEIITRGQVPPNPSELLMHPRFAELMEWASKEYDLVIVDTPPILAVTDPSIVGAF HHHCCEEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCHHHHHH AGTTLMVARFGQNTIKEIDVARNRFEQSGIEVKGVIFNAIEKKASSSYGYGYYNYAYSSN HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCC NT CC >Mature Secondary Structure TIQPSQQSHTDNSDEIDLGKLLGILLDAKWLIMLTTFVFSVFGIAFALLSTPIYKADAL CCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE IQIEEKSSGGISSMVGDMGELFSQESSATTEVEIIKSRMILGETVDKFNLTTVTSPNYAP EEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC IIGKGLARLTGNINHIAVSRFTLPSHMEDYTHTIQILDVEQGTYQLVRDDERIIFKGKVG HHHHHHHHHCCCCCEEEEEEEECCHHHHCCCEEEEEEEECCCCCCEECCCCEEEEECCCC ELVTADDYSLFVAGFESNNGFEFTIGKRSRLEAIEWLKSSLSLSEQGKQTGILKLSFEGE CEEEECCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCC NKLKISEILNHISQIYFLQNVKRNSAEAEKSLSFLESHLPGIKSELTGYEDILNNYRQEN CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCC ESIDLGLEAQSTLRVMVELEAQLNELTFKESEISQRFTKDHPAYKALLDKRKTLLGEKER CCEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHH QNKQVQKLPKTQREVLRMTRDVEVNQQIYIQLMNKVQELGIIKAGTVGNVRILDDAQTYA HHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEECHHHHH HAVKPKKPLIVVLATLLGGMLSIAFVLVKAAFHRGVDSPDQIEQIGLPVYAAVPKSDFQI HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCCEE ELTNRFKSKKKNQGTQALLAESNPADLSVEALRGLRTSLHFAMLEAKNNILMISGPAPGI EEHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC GKSFISTNFSAVAAQTGQKVLLIDADMRKGYLQQSFGVNWDNGLSDVLSGKQEFAQSIKT CHHHHHCCHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHH TAIENLEIITRGQVPPNPSELLMHPRFAELMEWASKEYDLVIVDTPPILAVTDPSIVGAF HHHCCEEEEECCCCCCCHHHHHCCCHHHHHHHHCCCCCCEEEECCCCEEEECCCHHHHHH AGTTLMVARFGQNTIKEIDVARNRFEQSGIEVKGVIFNAIEKKASSSYGYGYYNYAYSSN HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCEEEEEECCC NT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; a protein tyrosine [C]
Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]