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The map label for this gene is uidR [C]

Identifier: 218708265

GI number: 218708265

Start: 195753

End: 196391

Strand: Direct

Name: uidR [C]

Synonym: VS_0202

Alternate gene names: 218708265

Gene position: 195753-196391 (Clockwise)

Preceding gene: 218708261

Following gene: 218708271

Centisome position: 5.93

GC content: 42.88

Gene sequence:

>639_bases
ATGAAAACACGTGACAAGATTGTTTACGCAGCTCTAGAGCTTTTTAATGAGCACGGCGAGCGTAGTATTACGACCAATCA
TATTGCTGAGCACATCGAAATCAGCCCAGGAAACCTCTACTACCACTTCCGCAACAAACAAGAAATCGTACGTGATATAT
TTACTCTCTACTCGACAGAGTTGCTTGAAAGGTTTACTCCGATTCAAGGGCAGCAAGAAAGCCTGACACTGCTAAAGAGC
TACTTAGATTCTATCTTCACGCTGATGTGGAAGTACCGATTCTTCTATGCGAATTTACCTGAAATATTGTCTCGTGATGA
AAAGCTCCATCTTGATTACATGGCCGTTCAGGAAAAACTGCAAACGAATCTTGTGGATATTATGAGAGCATTTGTTGAGT
TGAATTTGCTAAAAGCAACAGATGCAGAAATGAAGTCGATGGTCACATCTCTTCACTTGATCGCATCGGGTTGGTTGGCG
TATCAGTCGGCGATGTCTCCAAAATCTCAAATTACGGAGCAAGTTGTTCACCAAGGAATGCTGCAGATGATCGCAACCGT
TAAACCGATTGCAACGACTCAAGGCTTTGAGCAACTGACATTGTTAGAAGATGGTGTGAGGGCGTTGAACTCAAAGTAG

Upstream 100 bases:

>100_bases
CCATTTTCATCAGAGCTAATTCGACCAGATGTGAACAGGTCGATCTATCTGTTTAGTGGCGATATACTGAACCACTAAAC
GGATAGGGATACTAATGCTA

Downstream 100 bases:

>100_bases
AAAGATACGAGTAAGCGATATGAATCGCGATGTCATTCCCTACAGCGAGGAACGAGCGTGATAGGGAACCTTTTTGTGTC
AGGGCTCGAAAGATGACTCA

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Tetr Family; Transcriptional Regulator Transcription Regulator Protein; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKTRDKIVYAALELFNEHGERSITTNHIAEHIEISPGNLYYHFRNKQEIVRDIFTLYSTELLERFTPIQGQQESLTLLKS
YLDSIFTLMWKYRFFYANLPEILSRDEKLHLDYMAVQEKLQTNLVDIMRAFVELNLLKATDAEMKSMVTSLHLIASGWLA
YQSAMSPKSQITEQVVHQGMLQMIATVKPIATTQGFEQLTLLEDGVRALNSK

Sequences:

>Translated_212_residues
MKTRDKIVYAALELFNEHGERSITTNHIAEHIEISPGNLYYHFRNKQEIVRDIFTLYSTELLERFTPIQGQQESLTLLKS
YLDSIFTLMWKYRFFYANLPEILSRDEKLHLDYMAVQEKLQTNLVDIMRAFVELNLLKATDAEMKSMVTSLHLIASGWLA
YQSAMSPKSQITEQVVHQGMLQMIATVKPIATTQGFEQLTLLEDGVRALNSK
>Mature_212_residues
MKTRDKIVYAALELFNEHGERSITTNHIAEHIEISPGNLYYHFRNKQEIVRDIFTLYSTELLERFTPIQGQQESLTLLKS
YLDSIFTLMWKYRFFYANLPEILSRDEKLHLDYMAVQEKLQTNLVDIMRAFVELNLLKATDAEMKSMVTSLHLIASGWLA
YQSAMSPKSQITEQVVHQGMLQMIATVKPIATTQGFEQLTLLEDGVRALNSK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24537; Mature: 24537

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRDKIVYAALELFNEHGERSITTNHIAEHIEISPGNLYYHFRNKQEIVRDIFTLYSTE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
LLERFTPIQGQQESLTLLKSYLDSIFTLMWKYRFFYANLPEILSRDEKLHLDYMAVQEKL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
QTNLVDIMRAFVELNLLKATDAEMKSMVTSLHLIASGWLAYQSAMSPKSQITEQVVHQGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LQMIATVKPIATTQGFEQLTLLEDGVRALNSK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTRDKIVYAALELFNEHGERSITTNHIAEHIEISPGNLYYHFRNKQEIVRDIFTLYSTE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
LLERFTPIQGQQESLTLLKSYLDSIFTLMWKYRFFYANLPEILSRDEKLHLDYMAVQEKL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
QTNLVDIMRAFVELNLLKATDAEMKSMVTSLHLIASGWLAYQSAMSPKSQITEQVVHQGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LQMIATVKPIATTQGFEQLTLLEDGVRALNSK
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA