| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is 218708248
Identifier: 218708248
GI number: 218708248
Start: 180940
End: 181524
Strand: Direct
Name: 218708248
Synonym: VS_0185
Alternate gene names: NA
Gene position: 180940-181524 (Clockwise)
Preceding gene: 218708247
Following gene: 218708249
Centisome position: 5.48
GC content: 42.91
Gene sequence:
>585_bases ATGAGATATCGTGGACGCCGGTGGAACAACATACTCATGTTCAGTGTGATCGCTTTTATTGGCGTGTTAAACCTTCCAAC TTTGATCAAAACGTACCTTATCGAGCCCGAACCTGAAGTTAAGATCAGCGGTTCTTATCCTTCTCTTTTAAATCCAGCAG ATGAGCTTCAAGCTTTGCATTTTGCTAATTGGTCAGTTGTAGTAGAAGACGATCATTGGGCTTATCAATTTAAAGACACA GTGCTTCCTCAAACTACCAGTGCACAAGAGCTGTCACAGAGGTGGCAGGAACTTGTGGGCACCGAAATTGACTCTCAAAC CTATACCGACCTCTCACCACAATTGAATACCCCGCATACCATTGAGGTTTGGTATCAAGACCAAGAAGAGCCCCAGCGTA TTACCTATTATCAACTTGCTGAGTTTTGGTTGCTAAAAAACTGGAATGATCAGTGGCTGGCGGTGTCTATTGAAGAAAGC TACTTGTTTCCAGAATTTGGCTCAGACCAGTCCTTTAAATCATACCAGTCATTCAAATCAGACAAGCTATCTATATCAGA CGAACCATCTCTATCGGACGACTAA
Upstream 100 bases:
>100_bases TTTGATATAGCGTCTGATAGATAGAAAACCGTACAACATAGAAAGTATTGCCACTTTCACGATATACTGATTACTCAATA GGTTAGATGAGCAGAATCAT
Downstream 100 bases:
>100_bases CTATGCCTGAATTACCCGAAGTTGAAGTAAGCCGCATGGGGATCTCGCCTCATTTAGTCGGTGAGACGATTAAAACGCTT ACCTTTCGTACCCCCAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MRYRGRRWNNILMFSVIAFIGVLNLPTLIKTYLIEPEPEVKISGSYPSLLNPADELQALHFANWSVVVEDDHWAYQFKDT VLPQTTSAQELSQRWQELVGTEIDSQTYTDLSPQLNTPHTIEVWYQDQEEPQRITYYQLAEFWLLKNWNDQWLAVSIEES YLFPEFGSDQSFKSYQSFKSDKLSISDEPSLSDD
Sequences:
>Translated_194_residues MRYRGRRWNNILMFSVIAFIGVLNLPTLIKTYLIEPEPEVKISGSYPSLLNPADELQALHFANWSVVVEDDHWAYQFKDT VLPQTTSAQELSQRWQELVGTEIDSQTYTDLSPQLNTPHTIEVWYQDQEEPQRITYYQLAEFWLLKNWNDQWLAVSIEES YLFPEFGSDQSFKSYQSFKSDKLSISDEPSLSDD >Mature_194_residues MRYRGRRWNNILMFSVIAFIGVLNLPTLIKTYLIEPEPEVKISGSYPSLLNPADELQALHFANWSVVVEDDHWAYQFKDT VLPQTTSAQELSQRWQELVGTEIDSQTYTDLSPQLNTPHTIEVWYQDQEEPQRITYYQLAEFWLLKNWNDQWLAVSIEES YLFPEFGSDQSFKSYQSFKSDKLSISDEPSLSDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22757; Mature: 22757
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRGRRWNNILMFSVIAFIGVLNLPTLIKTYLIEPEPEVKISGSYPSLLNPADELQALH CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHE FANWSVVVEDDHWAYQFKDTVLPQTTSAQELSQRWQELVGTEIDSQTYTDLSPQLNTPHT ECCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE IEVWYQDQEEPQRITYYQLAEFWLLKNWNDQWLAVSIEESYLFPEFGSDQSFKSYQSFKS EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCHHHHHHHCC DKLSISDEPSLSDD CCCCCCCCCCCCCC >Mature Secondary Structure MRYRGRRWNNILMFSVIAFIGVLNLPTLIKTYLIEPEPEVKISGSYPSLLNPADELQALH CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHE FANWSVVVEDDHWAYQFKDTVLPQTTSAQELSQRWQELVGTEIDSQTYTDLSPQLNTPHT ECCCEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE IEVWYQDQEEPQRITYYQLAEFWLLKNWNDQWLAVSIEESYLFPEFGSDQSFKSYQSFKS EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCCCCHHHHHHHCC DKLSISDEPSLSDD CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA