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The map label for this gene is cc4 [H]

Identifier: 218708176

GI number: 218708176

Start: 103750

End: 104367

Strand: Direct

Name: cc4 [H]

Synonym: VS_0112

Alternate gene names: 218708176

Gene position: 103750-104367 (Clockwise)

Preceding gene: 218708173

Following gene: 218708177

Centisome position: 3.14

GC content: 44.98

Gene sequence:

>618_bases
ATGAAGAAATTAGCGCTAATTTTGAGTCTTTTAGCCAGCTGCTCAGTATGGGCTCAAGGTAGTATTGAAGCTGGTAAAGC
CAAATCACAAACATGTGTTGCCTGCCACGGTGCTGACGGCAACAGTCTGATCACTCAGTACCCTAAGCTGGCTGGTCAAC
ATGAGAAGTATCTAGAGAAGCAGTTAAAAGAGCTTAAGCTAGGTATGACGAGTGGTGGTAAACAAGGTCGTTACGAGCCT
GTAATGGGTGCAATGGCGATGCCTTTATCTGAAGAAGATATGGCTGACCTAGCGGCATACTACGCATCTCTCCCTATCTC
TAGTAACTCTACTCCTGAAAATGTAGTAGATGAAGGTAAGGTTCTTTACACTGCGGGTAACGCAGAACGTGGCGTAACGG
CGTGTATTGCTTGTCACGGCCCTCGTGGTAATGGTACCGAACTTTCTGGTTTCCCTAAGATTTCAGGTCAGCACGCAGAT
TACATCAAGGCTCAACTTGAAAAATTCCGCGATGGTGATCGTAATAACGACATGAATGCGATGATGCGTGATGTAGCTAA
AAAGTTAACAGACGCAGATATTGATACCTTATCGAAGTACGTTGGTGGTTTACACTAA

Upstream 100 bases:

>100_bases
AATTTGTGTAAAATAACCGTGCTCGGCATAAGGTCGCCTATTGTACCATGAGTGGCAACATAGAGTGGTACTGGAAGCTT
GATAATTATAATGGAATGTC

Downstream 100 bases:

>100_bases
TATGTCGGTTTCTTGCTCTTAGCCAGAGTAATGAAATGTACGTTCGAGCGAGATTGAAGAGACGCCCCGATCAGTAATGG
TTGGGGCGTTTTCTTTTGTA

Product: cytochrome c4 precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKKLALILSLLASCSVWAQGSIEAGKAKSQTCVACHGADGNSLITQYPKLAGQHEKYLEKQLKELKLGMTSGGKQGRYEP
VMGAMAMPLSEEDMADLAAYYASLPISSNSTPENVVDEGKVLYTAGNAERGVTACIACHGPRGNGTELSGFPKISGQHAD
YIKAQLEKFRDGDRNNDMNAMMRDVAKKLTDADIDTLSKYVGGLH

Sequences:

>Translated_205_residues
MKKLALILSLLASCSVWAQGSIEAGKAKSQTCVACHGADGNSLITQYPKLAGQHEKYLEKQLKELKLGMTSGGKQGRYEP
VMGAMAMPLSEEDMADLAAYYASLPISSNSTPENVVDEGKVLYTAGNAERGVTACIACHGPRGNGTELSGFPKISGQHAD
YIKAQLEKFRDGDRNNDMNAMMRDVAKKLTDADIDTLSKYVGGLH
>Mature_205_residues
MKKLALILSLLASCSVWAQGSIEAGKAKSQTCVACHGADGNSLITQYPKLAGQHEKYLEKQLKELKLGMTSGGKQGRYEP
VMGAMAMPLSEEDMADLAAYYASLPISSNSTPENVVDEGKVLYTAGNAERGVTACIACHGPRGNGTELSGFPKISGQHAD
YIKAQLEKFRDGDRNNDMNAMMRDVAKKLTDADIDTLSKYVGGLH

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 21960; Mature: 21960

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLALILSLLASCSVWAQGSIEAGKAKSQTCVACHGADGNSLITQYPKLAGQHEKYLEK
CHHHHHHHHHHHHHCHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHH
QLKELKLGMTSGGKQGRYEPVMGAMAMPLSEEDMADLAAYYASLPISSNSTPENVVDEGK
HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCE
VLYTAGNAERGVTACIACHGPRGNGTELSGFPKISGQHADYIKAQLEKFRDGDRNNDMNA
EEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
MMRDVAKKLTDADIDTLSKYVGGLH
HHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKKLALILSLLASCSVWAQGSIEAGKAKSQTCVACHGADGNSLITQYPKLAGQHEKYLEK
CHHHHHHHHHHHHHCHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHH
QLKELKLGMTSGGKQGRYEPVMGAMAMPLSEEDMADLAAYYASLPISSNSTPENVVDEGK
HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCE
VLYTAGNAERGVTACIACHGPRGNGTELSGFPKISGQHADYIKAQLEKFRDGDRNNDMNA
EEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHH
MMRDVAKKLTDADIDTLSKYVGGLH
HHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]