| Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011753 |
| Length | 3,299,303 |
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The map label for this gene is tatA
Identifier: 218708167
GI number: 218708167
Start: 93813
End: 94067
Strand: Direct
Name: tatA
Synonym: VS_0101
Alternate gene names: 218708167
Gene position: 93813-94067 (Clockwise)
Preceding gene: 218708166
Following gene: 218708168
Centisome position: 2.84
GC content: 41.96
Gene sequence:
>255_bases ATGGGTGGTATCAGTATTTGGCAACTTCTAATCATTGCTGTAATTGTAATTTTACTTTTCGGAACAAAGAAACTGCGCGG TATGGGTGGTGACTTAGGTTCAGCGGTGAAAGGCTTCAAAAAAGCGATGAGCGATGAAGACAAGCCTGCAGATAAGAAAG ATGCAGACTTTGAACCAAAGAATATTGAACAGCAGAAGACAGAAGCTAGCGCTGAAACAACTGCTGAAACGAAGAAAGAC AAAGAGCAGGCGTAA
Upstream 100 bases:
>100_bases AGGTGTCACATTTTGGTTGCTTAGTTGGCGAGCTTACCGTCGTTAGACAGTAGACTCTCTTAATATTTTTTATGTGTAGA CAGACCCGAGGACAATGACA
Downstream 100 bases:
>100_bases ATCGTGTTTGATATCGGTTTTTGGGAACTGGTATTAATATCTGTCGTTGGGTTAGTGGTTTTAGGACCTGAGCGTTTGCC CGTGGCGATTCGTAGTATTT
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MGGISIWQLLIIAVIVILLFGTKKLRGMGGDLGSAVKGFKKAMSDEDKPADKKDADFEPKNIEQQKTEASAETTAETKKD KEQA
Sequences:
>Translated_84_residues MGGISIWQLLIIAVIVILLFGTKKLRGMGGDLGSAVKGFKKAMSDEDKPADKKDADFEPKNIEQQKTEASAETTAETKKD KEQA >Mature_83_residues GGISIWQLLIIAVIVILLFGTKKLRGMGGDLGSAVKGFKKAMSDEDKPADKKDADFEPKNIEQQKTEASAETTAETKKDK EQA
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=88, Percent_Identity=57.9545454545455, Blast_Score=94, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_VIBSL (B7VHC4)
Other databases:
- EMBL: FM954972 - RefSeq: YP_002415788.1 - GeneID: 7159776 - GenomeReviews: FM954972_GR - KEGG: vsp:VS_0101 - HOGENOM: HBG751935 - OMA: FTSIWHW - ProtClustDB: PRK04598 - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 9111; Mature: 8979
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x194eaa04)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGISIWQLLIIAVIVILLFGTKKLRGMGGDLGSAVKGFKKAMSDEDKPADKKDADFEPK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC NIEQQKTEASAETTAETKKDKEQA CCHHHHHHHHHHHHHHHHHHCCCH >Mature Secondary Structure GGISIWQLLIIAVIVILLFGTKKLRGMGGDLGSAVKGFKKAMSDEDKPADKKDADFEPK CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC NIEQQKTEASAETTAETKKDKEQA CCHHHHHHHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA